Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2741 |
Symbol | |
ID | 4023239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3060344 |
End bp | 3063475 |
Gene Length | 3132 bp |
Protein Length | 1043 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962940 |
Product | heavy metal efflux pump CzcA |
Protein accession | YP_569871 |
Protein GI | 91977212 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCC GCGTCATCGC GTGGTCCGCG CACAATCTGC TGCTGGTGCT GTTCGGCGCC GGATTCGCCG CAGCGGCGGG CCTCTACGCC CTGCTCCATC TCCCGCTCGA CGCGATCCCT GACCTCTCCG ACACCCAGGT CGTAATCTAC ACCGAGTATC CCGGCCAGGC GCCGCAGGTG ATCGAGGATC AGGTCACCTA TCCCTTGACC ACGGCGATGC TGACGGTGCC GAAGTCGAAA GTGGTGCGCG GCTTCTCGTT CTTCGGCGCG TCGTTCGTTT ACGTGATCTT CGAGGACGGT ACCGACATCT ATTGGGCGCG TTCGCGCGTG CTCGAGTTCC TCAACGGCGC CGCGGCGCGA TTGCCGGCCG GCGTCGCTCC GACGATCGGT CCGGACGCCA CCGGCGTCGG CTGGGTGTAT CAGTACGCCG TGGTTTCCAA GGAGCTGAAC CTCGCCGATA CCCGCAGCCT TCAGGACTGG ACCCTTCGCT TCGCGCTCGC CAAGGCCGAG GGCGTCGCCG AAGTCGCGAG CATCGGCGGC TTCGTCAAGC AGTACAACGT CGTGCTCGAC CCGCAGCGGA TGCGCGATCG CGGCATCACC ATGCAGCGGA TGCGCGAGAC GATCCGCTCC AGCAACGCCG ACGTCGGCGG CCGCACTGTC GAACTGTCCG AATTCGAGTA TGTCATTCGC GGCAAGGGCT ATCTGAAGGA CATCAACGAT CTCGGCAATA TCGTGCTGAA GACCAGCAAC GGCACGCCGG TGCTGCTGCG CGACGTTGCA CGAGTCGAAC TCGGCCCCGA TGAGCGGCGC GGCATCGCCG AGCTGAACGG CGAAGGCGAG GTTGCGAGCG GCATCGTGCT GCAGCGCTTC GGCGTCAATG CGCTCGACGT CATCGAGAAC GTCAAGAAGC GCTTCAAGGA GATCGCGAGC AGCCTGCCGA AATCGGTGGA GATCGTTCCG GTCTACGATC GCTCCAACCT GATCTACGCC GCGGTCGAGA CCTTGAAGAC CACGCTGCTC GAGGAGAGCC TCGTGGTGGC GGCGGTGTGC ATCGTGTTCC TGTTGCACGT GCGCAGCGCG CTCGTCGCCA TCCTGATGCT GCCGGTCGGC GTGTTGATGG CGTTCGGAGC GATGAAGCTG ATCGGCCTCG GCTCCAACAT CATGAGCCTC GGCGGCATCG CGATTGCGAT CGGCGCCATG GTCGATGCTG CGATCGTGAT GATCGAGAAC GCCCACAAGC ATCTCGAGCG CGCCGAGCCT GGTCGCTCGC GCGTGAGCGT GCTGATCGAG GCCGCGTCCG AAGTCGGACC CGCGCTGTTC TTCAGCCTGC TGATCATCAC CGTGTCGTTC ATGCCGATCT TCACGCTGGA ATCGCAGGAG GGCCGGCTTT TCAGCCCGCT CGCCTTCACC AAGACCTTCG CGATGGCCGC AGCCGCATTG CTGTCGGTCA CGCTGGTGCC GGCGCTCATG GTGATCTTCG TCCGCGGACG GTTCGTCCCG GAGCACAAGA ACATCGTCAA TCGCGCGCTG ATCTTCGTCT ACCGTCCGGT GATCAGCGGC GTGCTCCGCG CCAAGGTCGC GGTGATCCTC CTCGCGCTCG TTGTGCTCGG CGTATCGATC TGGCCGGCGC GTCAGCTCGG CACCGAATTC ATGCCGGCGC TCGACGAGGG CACGCTGCTG TACATGCCGA CCACCCTGCC CGGCATCTCG ATCACCAAGG CGGGCGAGCT GCTGCAGATG CAGGACCGCA TCATTCGCGG CTTCCCGGAG GTCGCATCGG TCTACGGCAA GGCCGGCCGA GCTGCGACTG CGACCGACCC GGCGCCGATC GAGATGTTCG AGACGGTGAT CAATCTGAAG CCGAAGGAGC AATGGCGCCC CGGCCTCACC ACCGATGGTC TGATCGCCGA ACTCGACAAG GCGCTGCAAT TCCCCGGCGT GTCCAACGCC TGGACCATGC CTATCAAGGC CCGCATCGAC ATGCTCTCCA CCGGCATCCG GACGCCGGTC GGGGTCAAGG TGATGGGCAC CGATCTGGTC GAGATCGACA AGCTCGCCAA GCAGATCGAA CGGGTGCTGA AAGCCGTGCC GGGGACGTTA TCGGCCTATG CCGAGCGTGC GATCGGCGGC TATTACTTGG AGATCACGCC GGATCGCGCA GCACTTGCGC GTTACGGTCT GTTGATCCAG GACATGCAGG ACGCCATCGC CATCGCGCTC GGCGGCCAGA CGGTCACCAC CACAGTCGAG GGCCGCCAGC GCTTCAGCGT CAACATGCGC TATCCGCGCG AGCTCCGCGA CAATCCGAAG GCGATCGCCA GCGACGTTCT GGTGCCGCTG CCGGGCGGCG GGGCGGTGCC GCTCGGCGAG GTCGCGACGG TGACGCCGAC GCGCGGACCG ACCTCGATCC GCACCGAGAA CGGCCAGCTT GCAACCTACA TCTATGTCGA CATCCGCGAC CGCGACCTCG GCGGCTACGT CGCCGACGCA AAGCGGGCGG TTCAGGCCAG CATCGCGTTT CCGCAAGGGT CATACGTCGT CTGGAGCGGC CAATACGAGT ACCTCGAGCG CGCCGCGGCG CGGCTCAAGA TCGTCGTGCC GGTGACGCTG ATGATCATCT TCCTGCTGCT CTACCTGAAT TTCAGGTCGC TGACGGAAAC GCTGATCGTG ATGCTATCGC TGCCGTTCGC GCTGGTCGGC GGGCTGTGGA TGATGTGGGC GCTCGGCTTC AACCTGTCGG TCGCGGTCGC CGTCGGCTTT ATCGCACTCG CCGGCGTGGC GGCAGAGACC GGCGTTGTGA TGCTGATCTA TCTCGATCAC GCACTCGACG CGATGAAGGC GACCCGCGCC GCTGAAGGCC GGCCGCTGTC GCTGAGCGAT CTGCACGCAG CGATCATGGA GGGCGCCGTC GACCGCGTTC GTCCGAAGAT GATGACGGTG GTCGCGATCA TGGCCGGCCT GCTGCCGATT TTGTGGAGTA CCGGCGCCGG CTCCGAGATC ATGCAGCGCA TCGCCGTGCC GATGATCGGC GGCATGGTCT CGTCCACCTT GCTGACGCTG ATCGTCATCC CTGCGATCTA CGGCCTGATC AAGGGATTCC GGCTGCCGAA GCAAGGCGAC GCAGCGGCGT GA
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Protein sequence | MIARVIAWSA HNLLLVLFGA GFAAAAGLYA LLHLPLDAIP DLSDTQVVIY TEYPGQAPQV IEDQVTYPLT TAMLTVPKSK VVRGFSFFGA SFVYVIFEDG TDIYWARSRV LEFLNGAAAR LPAGVAPTIG PDATGVGWVY QYAVVSKELN LADTRSLQDW TLRFALAKAE GVAEVASIGG FVKQYNVVLD PQRMRDRGIT MQRMRETIRS SNADVGGRTV ELSEFEYVIR GKGYLKDIND LGNIVLKTSN GTPVLLRDVA RVELGPDERR GIAELNGEGE VASGIVLQRF GVNALDVIEN VKKRFKEIAS SLPKSVEIVP VYDRSNLIYA AVETLKTTLL EESLVVAAVC IVFLLHVRSA LVAILMLPVG VLMAFGAMKL IGLGSNIMSL GGIAIAIGAM VDAAIVMIEN AHKHLERAEP GRSRVSVLIE AASEVGPALF FSLLIITVSF MPIFTLESQE GRLFSPLAFT KTFAMAAAAL LSVTLVPALM VIFVRGRFVP EHKNIVNRAL IFVYRPVISG VLRAKVAVIL LALVVLGVSI WPARQLGTEF MPALDEGTLL YMPTTLPGIS ITKAGELLQM QDRIIRGFPE VASVYGKAGR AATATDPAPI EMFETVINLK PKEQWRPGLT TDGLIAELDK ALQFPGVSNA WTMPIKARID MLSTGIRTPV GVKVMGTDLV EIDKLAKQIE RVLKAVPGTL SAYAERAIGG YYLEITPDRA ALARYGLLIQ DMQDAIAIAL GGQTVTTTVE GRQRFSVNMR YPRELRDNPK AIASDVLVPL PGGGAVPLGE VATVTPTRGP TSIRTENGQL ATYIYVDIRD RDLGGYVADA KRAVQASIAF PQGSYVVWSG QYEYLERAAA RLKIVVPVTL MIIFLLLYLN FRSLTETLIV MLSLPFALVG GLWMMWALGF NLSVAVAVGF IALAGVAAET GVVMLIYLDH ALDAMKATRA AEGRPLSLSD LHAAIMEGAV DRVRPKMMTV VAIMAGLLPI LWSTGAGSEI MQRIAVPMIG GMVSSTLLTL IVIPAIYGLI KGFRLPKQGD AAA
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