Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2717 |
Symbol | |
ID | 4023215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3032500 |
End bp | 3034044 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962916 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_569847 |
Protein GI | 91977188 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.894409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGC GAAATTCATT CTACATCACC ACCGCGATCT CCTACCCGAA CGGCGCGCCG CATATCGGCC ACGCCTATGA GGCGATCGCG ACCGACGCGC TGGCGCGATT CCAGCGGCTC GACGGCAAGG ATGTGTTCTT CCTGACCGGC ACCGACGAGC ACGGGCTGAA AATGATCCAG ACCGCGCAGA AGGAGGGGAT CGAGACCCAC GTTCTCGCCG CCCGCAACGC CGGCCGCTTC CGCGACATGG ACGATCGCTT CGGCGTGTCC TACGACCGCT TCATCCGCAC CTCGGAGGAG CAGCATCATC GCTCGGTCCA GGAGGTCTGG AAGCGGATGC AGGCGAACGG CGATATCTAT CTCGACAGCT ATGCCGGCTG GTACTCGGTC CGCGACGAGG CCTATTACGC CGAGGACGAA ACCATTGTCG GCGAGGACAA TGTGCGCCGC GGCCCGCAGG GCTCACCGGT GGAGTGGGTC GAGGAGAAGA GCTACTTCTT CAAACTGTCG GCCTATCAGG ACAGACTGCT GAAGCTGTAT GAGGATCAAC CGGATTTCAT CGGCCCCGAC TCGCGCCGCA ACGAGGTGAT CAGCTTCGTC AAGGGCGGGC TCAAGGACCT CTCGGTGTCG CGCACCACTT TCGACTGGGG CGTCGAGGTG CCGGGCGACC CCGAGCATGT GATGTATGTC TGGGTCGATG CGCTGACCAA CTACATCACC GGCGTCGGCT TCCCCGACGA GACCGACGCC AACTGGCGCT ACTGGCCGGC CGACGTCCAC GTCATCGGCA AGGATATCAT CCGCTTCCAC GCGGTGTACT GGCCGGCGTT CCTGATGTCG GCGGGCATCC CGGTGCAGAA GCGCGTCTAC GCCCACGGAT TCCTGTTCAA CAAGGGCGAG AAGATGTCGA AGTCGGTCGG CAACATCGTC GACCCGTTCA ATCTCGCCGA CCAATACGGC GTTGACCAGG TGCGCTATTT CTTCCTGCGC GAGGTGCCGT TCGGCTCGGA CGGCAGCTAC AATCACGAGG CGATCGTCAA CCGCATCAAC GCCGACCTCG CCAATGATCT CGGCAATCTG GCGCAGCGTT CGCTGACCAT GATCGCCAAG CAGTGCGAGG CCAAGGTGCC GGAGCACGGC GACTTCAGCG ACGCCGACAA GGCGATGCTG GCGATGGCCG ACGGCATGAT CGCGCCGGCG CGGACCGCGA TGGCGACGCA GCAGATCCAT CAGGCGCTGA ACGCGGTGTG GGCGGTGGTG GCGGAAGCCA ATCGCTACTT CGCGGGCGAA GCGCCGTGGG CGCTGGCCAA GACCGATCCG CCGCGGCAGA AGACGGTGCT CTACGTCACC GCCGAGGTGC TTCGCCAGAT CGGCATTCTG GCGCAACCCG CGATTCCGGG TTCGGCGACG AAGCTGCTCG ACATTCTCGG CGTCGCCGCG GATGCGCGTG ACTTCGCGGC TCTGGCGACA CGGATCAAGC CCGGCACGCC ACTGCCGGCC CCGGCGCCGA TCTTCCCGCG CTATGTCGAG CCGGCGACGG TGTGA
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Protein sequence | MAQRNSFYIT TAISYPNGAP HIGHAYEAIA TDALARFQRL DGKDVFFLTG TDEHGLKMIQ TAQKEGIETH VLAARNAGRF RDMDDRFGVS YDRFIRTSEE QHHRSVQEVW KRMQANGDIY LDSYAGWYSV RDEAYYAEDE TIVGEDNVRR GPQGSPVEWV EEKSYFFKLS AYQDRLLKLY EDQPDFIGPD SRRNEVISFV KGGLKDLSVS RTTFDWGVEV PGDPEHVMYV WVDALTNYIT GVGFPDETDA NWRYWPADVH VIGKDIIRFH AVYWPAFLMS AGIPVQKRVY AHGFLFNKGE KMSKSVGNIV DPFNLADQYG VDQVRYFFLR EVPFGSDGSY NHEAIVNRIN ADLANDLGNL AQRSLTMIAK QCEAKVPEHG DFSDADKAML AMADGMIAPA RTAMATQQIH QALNAVWAVV AEANRYFAGE APWALAKTDP PRQKTVLYVT AEVLRQIGIL AQPAIPGSAT KLLDILGVAA DARDFAALAT RIKPGTPLPA PAPIFPRYVE PATV
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