| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2687 |
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| Symbol | ihfA |
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| ID | 4023184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3002757 |
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| End bp | 3003128 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637962885 |
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| Product | integration host factor subunit alpha |
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| Protein accession | YP_569817 |
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| Protein GI | 91977158 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.48286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGGGA CCGGACGAAC AGTCACACGT GTCGATCTTT GTGAAGCGGT CTACCAAAAG
GTAGGTCTGT CGCGCACGGA GTCGTCGGCA TTTGTCGAAC TGGTACTGAA AGAGATCACT
GATTGCCTCG AGAAGGGCGA AACGGTGAAG CTGTCGTCGT TTGGTTCGTT TCTGGTTCGG
CAGAAGGGAC AGCGTATCGG CCGTAATCCC AAAACCGGGA CTGAAGTGCC GATCTCGCCG
CGCCGTGTGA TGGTGTTCAA GCCGTCCGCG ATCCTCAAGC AACGCATCAA CGCCAACGGT
TCCGCGCCCT CGATGTCGTC GTCCGCCAGC GCCGTGGATG ATGACAAATC CGAGTCGGCA
TCCAGGACCT GA
|
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| Protein sequence | MTGTGRTVTR VDLCEAVYQK VGLSRTESSA FVELVLKEIT DCLEKGETVK LSSFGSFLVR
QKGQRIGRNP KTGTEVPISP RRVMVFKPSA ILKQRINANG SAPSMSSSAS AVDDDKSESA
SRT
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