Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2631 |
Symbol | |
ID | 4023128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2949742 |
End bp | 2950464 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637962829 |
Product | integral membrane protein TerC |
Protein accession | YP_569761 |
Protein GI | 91977102 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.124087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000345218 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTGATC TGATTTACAG TCCGGAAGCC TGGGCTGCAC TGCTGACGCT GACAGCGCTC GAAATCGTGC TGGGCATCGA CAACATCATC TTCCTCTCGG TTCTGGTCTC GCGCATTCCC GAGCCGCAGG CGACGCGGGC GCGGCAGATC GGTCTGGCGC TGGCGCTGAT CTTCCGCCTC CTGCTCCTGA GCGTGCTGGT CTGGTTGATC GGGTTGACTG CACCAGTGTT CAGCATCGCC GGGCAGTCGT TCTCCTGGCG CGACATCATC CTGATCGCCG GCGGCCTGTT CCTGATCGCC AAGGCGACGC ACGAGATTCA TGCCGAGGTC GAAGCGCGCG AGGCCGGGCA CAAGGGGCCG GACGTGCGGA CTGCGTTCGC CTGGGTGATC GTCCAGATCG TGATCGTCGA TCTGGTGTTC TCGATCGACT CGATCATCAC CGCGATCGGG ATGGCCAAGG ACATCGAGAT TATGGTCGCC GCGGTGCTGA TCGCGATGCT GATCATGTAC GTGTCGTCCG GGCCAGTGGC GCGGTTCGTC TCCGAACATC CAACCACCAA GATGCTGGCG CTGGCTTTCC TGGTGCTGAT CGGTGTCGCC TTGGTCGCCG ACGGCTTTGC GTTTCATATT CCCCGGGGAT ACATCTATTT TGCCATCTTG TTTTCGGGGG CGGTCGAGTT CTTCAACGTG CTCGCCAAGC GTAACCGCGT CAAACCGCAA TGA
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Protein sequence | MIDLIYSPEA WAALLTLTAL EIVLGIDNII FLSVLVSRIP EPQATRARQI GLALALIFRL LLLSVLVWLI GLTAPVFSIA GQSFSWRDII LIAGGLFLIA KATHEIHAEV EAREAGHKGP DVRTAFAWVI VQIVIVDLVF SIDSIITAIG MAKDIEIMVA AVLIAMLIMY VSSGPVARFV SEHPTTKMLA LAFLVLIGVA LVADGFAFHI PRGYIYFAIL FSGAVEFFNV LAKRNRVKPQ
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