Gene RPD_2627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2627 
Symbol 
ID4023124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2946146 
End bp2946478 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content57% 
IMG OID637962825 
Producthemimethylated DNA-binding region 
Protein accessionYP_569757 
Protein GI91977098 
COG category[S] Function unknown 
COG ID[COG3785] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02097] hemimethylated DNA binding domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.255241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000297322 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCAAGA CGAGAACCGC CAAGTTTCAG ATCGGCCAGA TCGTTCGCCA CCGGATCTTT 
TCGTTCCGCG GGGTGGTGTT CGACATCGAT CCGGAATTCA ACAATACCGA GGAATGGTGG
CTGTCGATTC CTGAAGAGGT CCGGCCGCAC AAGGACCAGC CGTTCTATCA CCTCCTCGCC
GAGAACGCCG ATTCCGAATA CGTCGCTTAT GTCTCGGAAC AGAACCTGCT ACCGGACGAT
TCCGGCGAGC CGATCCGGCA TTCGCAGGTC GCCGAAATCT TCGTCAAGGA CAAGGCCGGC
GGCTATCGCC CGCGCAATCC GTCGTTGAAT TAG
 
Protein sequence
MIKTRTAKFQ IGQIVRHRIF SFRGVVFDID PEFNNTEEWW LSIPEEVRPH KDQPFYHLLA 
ENADSEYVAY VSEQNLLPDD SGEPIRHSQV AEIFVKDKAG GYRPRNPSLN