| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2492 |
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| Symbol | |
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| ID | 4022983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2785143 |
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| End bp | 2787011 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637962685 |
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| Product | Poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_569623 |
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| Protein GI | 91976964 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.296162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCAT CAGCCCGACA ACGACAAAAT CGTATAAGAT ATTCGAACAG GGTAAAACGT
CCGCCGATGA CCGACATGCT ACCAGAAACA GCGTCTGCGA AAAAGTTCGA TCCGGAGGCT
TTCGCGCGTA ATCTGGCGCA GGCGATGGAG GCCGGCGGCC AAGCGCTGGC GACCATGCTG
AAGCCGCGCG AGACGATGGA CGGCAACAAT CAGCCGACCG AACTCACCGA AATCGTGAGG
ACGCTCACCA GCGTCGCCGA CTATTGGATG TCGGATCAGG CCCGGGCGGC CGAGCTGCAA
AACCGTCTCG GCAAGTCGTA TCTCGACCTG TGGGGCAGCG CCTCGCGCCG ACTGTCCGGC
GACCAGGTCG AGCCGACGAT CGAGCCGCCG CCACGGGACA AGCGCTTCGC CGATCCGGAA
TGGCGCTCCA ACCAGTTCTA CGACTTCGTC ATGCAGGCCT ATCTGCTGAC GTCGCAATGG
GCCAGCGAAC TGGTCGAGAA GGCCGATGGC CTCGACCCGC ACACCAAGAA GAAGGCGGCG
TTCTACGTCC AGCAAATCAC CAACGCGCTG GCGCCCTCCA ACTTCGTACC GACCAGCCCG
GAGCTGACGC GGAGCACGCT GGAGAGCAGC GGCGACAATC TGGTGCGCGG CATGAAGATG
CTGGCCGAGG ACATCCAGGC CGGCCGCGGC CATCTCAAGA TCCGCCAGTC GGACCCGTCC
AATCTCGAGG TCGGCGTCAA CATGGCGACG ACGCCCGGCA AGGTGATCTT CCAGAACGAG
ATCATGCAGC TGATCCAGTA TCAGCCTGCG ACCGAGACGG TGCTGCGCAC GCCGCTGCTG
ATCGTTCCGC CGTGGATCAA CAAGTTCTAC ATTCTCGATC TCAAGCCGGA AAAATCCTTC
ATCAAATACT GCGTCGACCA GGGCGTTTCG GTGTTCGTGA TCTCCTGGGT CAATCCCGAC
CGCAGCCTCG CCGACAAGAG CTTCGCCGAC TACATGAAGC TCGGGCCACT GACCGCGATG
GACGTGATCG AGAAGATCAC CGGCGAGATG AAGGTGCACA CCATCGGCTA TTGCGTCGGC
GGCACCCTGC TCGCCTCGAC GCTGGCGTGG CTGGCCGATC GCCGCCGCCA GCGCGTCACC
TCGGCGACCT TCCTGACCAC GCAGGTCGAT TTCACCCATG CCGGCGACCT GATGGTGTTC
GTCGACGAGG GCCAGATCTC GGCGCTGGAG CGCGACATGC GCGCCACCGG CGTGCTCGAA
GGCGCGCGGA TGGCGATGGC CTTCAACATG CTGCGGTCGA ACGATCTGAT CTGGTCCTAC
GTCGTCAGCA ACTATCTCAA GGGCCAGCCG CCGTCGGCGT TCGACCTGCT GCACTGGAAT
TCCGACGCGA CGCGAATGCC CGCGGCCAAC CACTCTTACT ATCTGCGCAA CTGCTATCTC
GACAACAAGT TGTCGGCGGG CACCATGGTG CTCGACGGAA CCGCGCTCGA TCTCGCCAAG
GTGAAAGTGC CGATCTACAA CCTCGCCACC CGCGAGGACC ATATCGCACC GGCGGAATCC
GTGCTGTACG GCTCGCAGTT CTTCGGTGGC CCGGTGAAAT ATGTGTTGTC AGGCTCCGGC
CATATCGCTG GCGTGATCAA TCCGCCGGCG GCGAACAAAT ATCAGTACTG GACCAACGAC
AACATCCAGG TCGGCTCCGT CGCCGAATGG CTGAAGGGCG CGCAGGAGCA CAAGGGCTCG
TGGTGGCCGG ACTGGCGGCA ATGGGTCGAG CAATTCGACC CCGAGCAGGT CCCTGCCCGC
GCCATCGGCA ACGACGCCTA TCCGCCGATC GAGGACGCGC CTGGGAGCTA CGTCCGGGTC
CGCTCCTGA
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| Protein sequence | MSSSARQRQN RIRYSNRVKR PPMTDMLPET ASAKKFDPEA FARNLAQAME AGGQALATML
KPRETMDGNN QPTELTEIVR TLTSVADYWM SDQARAAELQ NRLGKSYLDL WGSASRRLSG
DQVEPTIEPP PRDKRFADPE WRSNQFYDFV MQAYLLTSQW ASELVEKADG LDPHTKKKAA
FYVQQITNAL APSNFVPTSP ELTRSTLESS GDNLVRGMKM LAEDIQAGRG HLKIRQSDPS
NLEVGVNMAT TPGKVIFQNE IMQLIQYQPA TETVLRTPLL IVPPWINKFY ILDLKPEKSF
IKYCVDQGVS VFVISWVNPD RSLADKSFAD YMKLGPLTAM DVIEKITGEM KVHTIGYCVG
GTLLASTLAW LADRRRQRVT SATFLTTQVD FTHAGDLMVF VDEGQISALE RDMRATGVLE
GARMAMAFNM LRSNDLIWSY VVSNYLKGQP PSAFDLLHWN SDATRMPAAN HSYYLRNCYL
DNKLSAGTMV LDGTALDLAK VKVPIYNLAT REDHIAPAES VLYGSQFFGG PVKYVLSGSG
HIAGVINPPA ANKYQYWTND NIQVGSVAEW LKGAQEHKGS WWPDWRQWVE QFDPEQVPAR
AIGNDAYPPI EDAPGSYVRV RS
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