Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2458 |
Symbol | |
ID | 4022949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2745779 |
End bp | 2747092 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637962651 |
Product | FeS assembly protein SufD |
Protein accession | YP_569589 |
Protein GI | 91976930 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.833793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTATCG CAGTGGCGAA GACAGAGAAG GCGGACGTGG CGGGCGCGAA TTTCGCCAGC ATCGTCGCGA GCCAGCCGGG CGCGGGCAAG GTCGCGGACG CCCGCCGTGA GGCGTTCGAC GAATTTCAGC GCATCGGTCT GCCGCATCGT CGGATCGAGG AGTGGAAGTA CACCGATCTG CGCGCGCTGA TGCGCGAGGT GCTGCCGGTC GCGCCGACGC CGGACGCGGC GGCGCTGGCG CGCGCCGAGG CGGCGGTGAA ACTGCATGCG ATCGACGGCG TCCGCCGGCT CGTGCTGGTC GACGGCGCGC TGGCTGTGGC GCTGTCCGAT CTGTCGGCGC TGGAGGCCGG GCTGTCGATC CGCAGCCTGC GCGAGGCGCT CGACGCCGGC GACGACCGGC TGTTGTCGCT CGACACCGGC AATCCGATGA CGGCGCTGAA CACCGCGCTG ATGACCGATG GCGTGGTGAT CGACATCGCG GATGGCGCCA AACTGGCGAA GCCGCTGCAC ATCGTTCACA TCGCTTCGGG CGGCGCGCCA TCGGCGATGT TCACCCGCTC GCTGGTCAGC CTCGGCAAGG AATCGGCCGC GACAGTGGTC GAGAGCTTCG TCGCAGGCGA GGGCGCCGGC GTCTATCAGG TCCACGACAC CGCCGTGATG ACGGTCGGCG ACCGCGCGCG GCTCGACCAC GTCCGGCTGA TCGAGGATTC GCGCGACGCG TTCAACATCG CCTCGGCCGA GGTGCGCGTC GGCGCGCATG CGCATTACAG CGTCGCCGGC GTCACCACCG GCGCATTGGT CAGCCGTTAT CAGCTGGTCG TCAACATCGC CGGCGAGTAT GCGCGGGTCG AGACCAACGG CGTCAATCTG CTCAACGGCA AGCAGCACGC CGACACCACG CTGGTGATGA ACCACGACGT GCCGCATTGC GTCAGCCGCG AGGGCTTTCG CGCCGTGGTC GACGATCGCG GCCATTCGGT GTTTCAGGGC CGCATCAATG TGCGCCAGCC GGCGCAGCAG ACCGACGCCA AGATGATGAC CCGGGCGCTG CTGCTGTCCG ACGAGGCCGA GGCCGACAAC AAGCCGGAGC TGGAGATCTT CGCGGACGAC GTCACTTGCG GCCACGGCGC CGCGATCGGC GCGCTCGACG ATCAGCTGCT GTTCTATCTG CGCGCCCGCG GCCTGGCCGA GAAGGAAGCC GAAGCGCTGC TGATCCAGGC CTTCGTCGGC GAGGCGATCG AGGCGATCGC CGACGACAAT CTGCGTGAAC TGGCGATCGC CGCCGCGACG CGCTGGCTGG AGGCGCGGCG ATGA
|
Protein sequence | MSIAVAKTEK ADVAGANFAS IVASQPGAGK VADARREAFD EFQRIGLPHR RIEEWKYTDL RALMREVLPV APTPDAAALA RAEAAVKLHA IDGVRRLVLV DGALAVALSD LSALEAGLSI RSLREALDAG DDRLLSLDTG NPMTALNTAL MTDGVVIDIA DGAKLAKPLH IVHIASGGAP SAMFTRSLVS LGKESAATVV ESFVAGEGAG VYQVHDTAVM TVGDRARLDH VRLIEDSRDA FNIASAEVRV GAHAHYSVAG VTTGALVSRY QLVVNIAGEY ARVETNGVNL LNGKQHADTT LVMNHDVPHC VSREGFRAVV DDRGHSVFQG RINVRQPAQQ TDAKMMTRAL LLSDEAEADN KPELEIFADD VTCGHGAAIG ALDDQLLFYL RARGLAEKEA EALLIQAFVG EAIEAIADDN LRELAIAAAT RWLEARR
|
| |