| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2444 |
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| Symbol | |
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| ID | 4022935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2726062 |
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| End bp | 2728554 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962637 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_569575 |
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| Protein GI | 91976916 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.257563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTGC TGCTGCGGTT TTTCGGCTTT CTGTTCGCAG CCGGGACGAT CGTGTTTCTG
GTCGGCGTCG CCGGCGCGGC CGGGATGATC TGGCACTTCT CCAAGGACTT GCCCGACTAC
TCTCAGCTCC AGGATTATGA GCCGCCGGTG ATGACCCGCG TCCACGCATC GGACGGATCG
CTGCTCGGCG AATACTCCAA GGAGCGTCGG CTGTATCTGC CGATCCAGGC CGTGCCGAAG
CCGGTGATCA ACGCCTTCCT CGCCGCCGAA GACAAGAACT TCTACGAGCA CGGCGGCATC
GACTATTCGG GCATGGCGCG CGCCGCGATC CTGTACGCCC AGAACATCGG CTCCAACCGC
CGTCCGCAGG GCGCTTCGAC GATCACTCAG CAGGTCGCCA AGAACTTCCT GCTCACCAAC
GAGGTGTCCT TTACCCGTAA GATCAAGGAA GCCTTGCTGG CGATGCGGAT CGAGCGCGCC
TATTCGAAGG ACCGCATTCT CGAACTGTAT CTCAACGAGA TCTATCTCGG TCTCGGTGCC
TACGGAATCG CCGCAGCCTC GCTGGTGTAT TTCGACAAGT CGGTGAACGA ACTGACGGTG
TCGGAGGCGG CCTATCTGGC CGCTCTGCCG AAGGCGCCCG CGGTGCTGCA CCCGATCCGC
AACCACGACC GCGCGGTCGA GCGTCGCAAC TACGTGATCG ACCGCTTGCT CGAGAACGGC
TGGGTCAAGC AGGCCGACGC CGACAAGGCG CGCAAGGAGC CGCTGACCGT CACCAGCCGC
AGCACCGGCG CGCACACCTT CGCCGGCGAA TACTTCGCCG AGGAGGTTCG CCGCGACATC
TTCGAACGCT ACGGCGAGAA GAAGCTGTAT GAAGGCGGGC TGTCGGTGCG CACCACGCTC
GATCCCAAGC TGCAGGTCGA GGCGCGCAAG ACCATGACCG CCGGCCTCGT CAAATTCGAC
GAGGCGCAGG GCTGGCGCGG GTCGGCGTCG AAGCTCGACA TCAGCGGCGA CTGGGGCGTC
AAACTCGCCG ACGTCAAATC ACTGTCCGAC ATCTCGCCCT GGCGGATGGC CGTGGTGCTG
GACACCTCCG ATCAGTCGGC GCGGATCGGC TTCCAGCCGG GCCGTGAACT CGGCGGCGCG
GTATCGAAGC AGCGCGAGAC CGGGCTGATC ACGCTCGACG GCGTGAAATG GGCGAAACCG
GCGGCCGGCC CGCAGCGCGG CCGGACCCCC GGATCGGTCT CGCAGGTGCT GGCGGCCGGC
GACATCATCT ATGCCGATCC GCTGCTCGAC AAGGAGGGCA AGCCGGTCGA GGGACAATAC
CGGCTGCGCC AGATCCCCGA AGTCTCGGGC GCGATGGTGG CGATGGACCC GTGGACCGGC
CGCGTGGTGG CCATGGTCGG CGGCTTCTCG TTCGACCAGA GCCAGTTCAA TCGCGCCACC
CAGGCCTATC GGCAGCCCGG CTCGTCGTTC AAGCCGCTGG TGTATTCGGC GGCGATGGAC
AATGGCTATA CGCCGTCGAC CGTGGTGGTG GACGCCCCGA TCGAGATCGA TCAGGGCCAG
GGCGCCGCCG TGTGGCGACC GGAGAACTAT TCGACCGGCA AGTATTACGG CCCGCAGACC
CTGCGCAACG CGCTGCAGAA ATCGCTCAAC ACCGTGACGG TTCGATTGGC TCAGGATGTC
GGAATGCCGC TGATCGGCGA ATACGCCAAG CGGTTCGGCG TCTATGACGA ACTGCCGAAC
TATCTATCCT ATGCGCTCGG CGCCGGTGAG ACCACGGTGA TGCGGATGGT CACCGCCTAT
TCGATGTTCG CCAATGGCGG GCGGCGGGTG AAGGCGACGC TGATCGACCG TATCCAGGAC
CGCTACGGCC GCACCATCTT CAAGCACGAC GCCCGCGAAT GCCGCGGCTG CGACGCGCCG
GAAGGGTGGA AGAACCAGGC CGAGCCACAG CTCATCGATC GCCGCGAGCA GGTGCTCGAT
CCGATGACGG CCTACCAGAT CACGTCGATG ATGGAGGGCG TGGTGCAGGC CGGCACCGCG
ACGGTGCTGC GTGAGGTCGG CAAGCCGATC GCGGGCAAGA CCGGCACCAC CAATGACGAG
AAGGACGCCT GGTTCATCGG CTTCTCGCCG GATCTCGTGG TCGGCATCTA TTTCGGCTAC
GACAAGCCGC GCAATCTCGG CCGCGGCGCC ACCGGCGGGC ATCTCGCGGC TCCGGTCGCC
AAGGACTTCT TCAAGCTCGC GCTCGCCGAC AAGCCGGCGG TGCCGTTCCG CGTGCCGGCC
GGCATCAAGC TGATCCGCGT CGACGCCAAG AGCGGAATGC GCGCCGGCCC GGGCGACGGC
GGCCGCACCA TTCTCGAGGC GTTCAAGCCG GGCACCGCGC CGCCGGACAA TTATTCGGTG
ATCGGCGTCG CCGACGCAGA AGGTCGCCAG CAGCAGATGG CGCCGCCCGA CGATCGCGGC
TTCATGCGAC CGGGGACGGG CGGCCTCTAC TGA
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| Protein sequence | MRLLLRFFGF LFAAGTIVFL VGVAGAAGMI WHFSKDLPDY SQLQDYEPPV MTRVHASDGS
LLGEYSKERR LYLPIQAVPK PVINAFLAAE DKNFYEHGGI DYSGMARAAI LYAQNIGSNR
RPQGASTITQ QVAKNFLLTN EVSFTRKIKE ALLAMRIERA YSKDRILELY LNEIYLGLGA
YGIAAASLVY FDKSVNELTV SEAAYLAALP KAPAVLHPIR NHDRAVERRN YVIDRLLENG
WVKQADADKA RKEPLTVTSR STGAHTFAGE YFAEEVRRDI FERYGEKKLY EGGLSVRTTL
DPKLQVEARK TMTAGLVKFD EAQGWRGSAS KLDISGDWGV KLADVKSLSD ISPWRMAVVL
DTSDQSARIG FQPGRELGGA VSKQRETGLI TLDGVKWAKP AAGPQRGRTP GSVSQVLAAG
DIIYADPLLD KEGKPVEGQY RLRQIPEVSG AMVAMDPWTG RVVAMVGGFS FDQSQFNRAT
QAYRQPGSSF KPLVYSAAMD NGYTPSTVVV DAPIEIDQGQ GAAVWRPENY STGKYYGPQT
LRNALQKSLN TVTVRLAQDV GMPLIGEYAK RFGVYDELPN YLSYALGAGE TTVMRMVTAY
SMFANGGRRV KATLIDRIQD RYGRTIFKHD ARECRGCDAP EGWKNQAEPQ LIDRREQVLD
PMTAYQITSM MEGVVQAGTA TVLREVGKPI AGKTGTTNDE KDAWFIGFSP DLVVGIYFGY
DKPRNLGRGA TGGHLAAPVA KDFFKLALAD KPAVPFRVPA GIKLIRVDAK SGMRAGPGDG
GRTILEAFKP GTAPPDNYSV IGVADAEGRQ QQMAPPDDRG FMRPGTGGLY
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