| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2443 |
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| Symbol | |
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| ID | 4022934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2724526 |
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| End bp | 2725851 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962636 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_569574 |
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| Protein GI | 91976915 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.732787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGGG GCCGGGATTC GTTGTCAGGG CGCGCAAATC ATTTTGTTTT GTTCCGCGCA
ATCCTAGCGT GCGCTGCAGC ATTGCTGTGC GCGGCGCCGA CCGCCGGCGT GGCGGGGGAG
GCTGTGGCAA CGTCCGCTCC GGCGCCCACC AGCTTTCCGA TCGCCGCTGA AGTTCGATTG
GCGGGCGACG ATACACAGAC CCGTTTCGTT ATCGATCTCG ATCGGACGGT TCCGATGCGG
GCTTTCGCGC TGGCGGATCC GTATCGCGTG GTGATCGATC TGCCGCAGGT CAATTTCCGG
TTGCCGGCGG CGTCCGGCGG CACCGGCAGG GGCCTGATCA AGGCTTATCG CTACGGGCTG
GTGATGCCGG GCGGCTCGCG CGTCGTGCTG GAATTGTCCG GTCCTGCCAA GATCACCAAG
GCCGACATGC TCGAGGCCGC CAACGGTCAG CCGGCGCGGA TGGTGATCGA ACTTGGTTCG
GTCGACCGCA CGGCCTTCGT CGAGTCGTTG GGCGTCGAGA AAGGGCCGGA GCTGAGGCCG
GCGATCGGCG CGGCCGACGC GACGTCCTCG GTGCCTCATC GCGTCGAATC GCCGAAGCTG
GATGCGGCAA AGGACGATTT GCGTCCGGTG ATCGTGCTCG ATCCGGGCCA TGGCGGGATC
GACAACGGCA CCCAATCGCA GAGTGGCGTC TCCGAGAAGG CGCTGGTGCT CGAGTTCGCG
CTGGCGCTGC GCGACCAGAT GGAGAAGGGC GGCAAGTACC GCGTGGTGCT CACCCGCACG
GATGATACGT TCATTCCGCT CAACGACCGG GTGAAGATCG CGCGCGCGCA TTCCGCAGCG
CTGTTCGTTT CGATTCATGC CGACGCGTTG CCGCGCGGCG AGGGCGACGC CCAGGGCGCG
ACGATCTACA CGCTGTCCGA CAAGGCGTCC GACGCCGAGG CGCAGCGCCT GGCCGATGCG
GAAAACAAGG CCGACGCGAT CGGCGGCGTC AACCTGACCG AGGAGCCGAC CGAGGTCGCC
GACATCCTGA TCGACCTCGC GCAGCGGGAA ACCAAGACGT TCTCGAATCG ATTCGCCCAG
ACCTTGATGC GTGAGATGAA GAGTGCGACC CGGCTGCATA AGCAGCCGCT GAAATCCGCC
GGGTTCCGGG TGCTGAAGGC CCCAGACGTG CCGTCGGTGC TGCTCGAGCT CGGCTATGTC
TCGAACAAGG GCGATCTCAA ACAGCTGGTT TCGGAGCAGT GGCGGACCAA GACCGTGGGC
GCGGTCGCCC TGGCGATCGA TTCGTTTTTC GCCAAGCGGC TGGTCTCGGC CGGTAAGCCG
GACTGA
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| Protein sequence | MKRGRDSLSG RANHFVLFRA ILACAAALLC AAPTAGVAGE AVATSAPAPT SFPIAAEVRL
AGDDTQTRFV IDLDRTVPMR AFALADPYRV VIDLPQVNFR LPAASGGTGR GLIKAYRYGL
VMPGGSRVVL ELSGPAKITK ADMLEAANGQ PARMVIELGS VDRTAFVESL GVEKGPELRP
AIGAADATSS VPHRVESPKL DAAKDDLRPV IVLDPGHGGI DNGTQSQSGV SEKALVLEFA
LALRDQMEKG GKYRVVLTRT DDTFIPLNDR VKIARAHSAA LFVSIHADAL PRGEGDAQGA
TIYTLSDKAS DAEAQRLADA ENKADAIGGV NLTEEPTEVA DILIDLAQRE TKTFSNRFAQ
TLMREMKSAT RLHKQPLKSA GFRVLKAPDV PSVLLELGYV SNKGDLKQLV SEQWRTKTVG
AVALAIDSFF AKRLVSAGKP D
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