Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2332 |
Symbol | |
ID | 4022821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2601741 |
End bp | 2602715 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962525 |
Product | inner-membrane translocator |
Protein accession | YP_569465 |
Protein GI | 91976806 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.404854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA TTACGCAAAA CTCCGTTCCG ACCCCGACGA CGCGGCGTCC GATGCGCGAC GAGATGATCG CTTTCGCGCT GATGACGATC GTGCTGGCGG TGGTGCCGTT CACCGGCGTC TATCCGTTTT TCGTGATGCA GGGGCTGTGC TTCGCGCTGC TGGCCTGCGC CTTCAATCTG CTGATCGGCT ATGGCGGCCT GCTGTCGTTC GGTCACGCGA TGTTCCTCGG CACGGCGGGC TATGTCAGCG CCCACGCGCT GAAGGTGTGG GAACTGCCGC CCGAGCTCGC GATCGTGGCC GGCACTGCGG CGGCGTTCGG GCTCTCGGTC ATCACCGGCC TGATCGCGAT CCGCCGCCAG GGCATCTACT TCGCGATGAT CACCCTGGCG CTGTCGCAGC TGTTGTACTT CATCTATCTG CAGGCGCCGT TCACCCACGG CGAAGACGGC ATCCAGGGCA TCCCGCAGGG CAAGATGTTC GGCGTGATCG ACCTTCAGAA CACCACGACG CTGTATTTCG TGGTGCTGGC GGGCTTCCTG CTGGGCTTCT TGATCATCTA TCGCGCCATC AACTCGCCGT TCGGCGAGGT GCTGAAGGCG ATCCGCGAGA ACGAGCCGCG CGCGATCTCG CTCGGCTACA AGACCGACCA CTACAAGCTG ATGGCTTTCA TCCTGTCCGG CACGCTGGCG GGGTTCGCCG GCGCGCTCAA AGTGTTCGTG GCGCAGAACG CCTCGCTGAC CGACGTGCAC TGGTCGATGT CCGGTGAAAT CGTGCTGATG ACGCTGGTCG GCGGGCTCGG CACCGTGTTC GGTCCGGTGG TCGGCGCCTT CGTGATCATC GCCATGCAGC AGTATCTTGC GGGCTTCGGC CAATGGGTGA CGGTGATCCA GGGTGTGATC TTCGTCGCCT GCGTGCTGAC CTTCCGCCGG GGCATCGTCG GCGAGATCGG GCACTACTTC AAACGCTCGC TGTAA
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Protein sequence | MSTITQNSVP TPTTRRPMRD EMIAFALMTI VLAVVPFTGV YPFFVMQGLC FALLACAFNL LIGYGGLLSF GHAMFLGTAG YVSAHALKVW ELPPELAIVA GTAAAFGLSV ITGLIAIRRQ GIYFAMITLA LSQLLYFIYL QAPFTHGEDG IQGIPQGKMF GVIDLQNTTT LYFVVLAGFL LGFLIIYRAI NSPFGEVLKA IRENEPRAIS LGYKTDHYKL MAFILSGTLA GFAGALKVFV AQNASLTDVH WSMSGEIVLM TLVGGLGTVF GPVVGAFVII AMQQYLAGFG QWVTVIQGVI FVACVLTFRR GIVGEIGHYF KRSL
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