Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2252 |
Symbol | |
ID | 4022737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2514033 |
End bp | 2515115 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637962447 |
Product | alanine racemase-like |
Protein accession | YP_569388 |
Protein GI | 91976729 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0874636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC CGCTCGCCGC CAGGATCGCC CGCGACATCG GCACGCCCGC GCTGGTGATC GACATGGACC GCGTCGAGCG CAATATCGCG CGGGTGCAGG CGCTCTGCGA TGCGGCCGGC GTCGCCAACC GGCCGCATAT CAAGACCCAC AAATCCCCGC TGCTCGCCCA GATGCAGATC GCCGCCGGCG CCAGGGGCAT CACCTGCCAG AAGATCGGCG AGGCCGAGGT GATGGCCGAC GCCGGCATCG ACGATATCCT GATCAGCTAC AATCTGATCG GGGAGGAGAA GATGGCGCGG CTCGGCGCGC TGCACGCGCG CGCCGAGATG GTCGTTGCCG CCGACAACGA GGTGGTGATC GCCGGCCTGC CGGCCGCGGC CGCGCGCGCC GGCCGCCCGC TCGGCGTCGT GGTCGAATGC GACACCGGCC GCGCCCGCGC CGGGGTCGAG ACGCCCGCGG AAGCGATCGC GCTGGCGCGG TCCATCGCCG CGTCCGACGG GCTGATTTTC AAGGGCTTCA TGCTGTATCC GACCGAGACC GGCTGGCCGC AGGCGCAGCG CTTTTTCGAC GAGGCGCTGG CCGGAATCCG CGCGCACGGC CTTGACGCCG CGATGGTCTC GACCGGCGGC TCGCCGAACC TGAAAAATCT CGGCCAGCTC GCGGGGGCGA CCGAGCATCG TCCCGGCACC TACGTCTACA ACGACAGGAT GCAGGTTGCG GCCGGCGTCG CGAGCTGGGA CGATTGCGCG TTGACGATCT ACTCCACCGT GGTCAGCCGC GCCGCGCCTG AGCGCGGCAT CCTCGACGCC GGCTCGAAAA CGCTGACCTC GGACCCAGGC GGCGGCCTCG ACGGCTTCGG CCTGATCCTC GACCATCCCG AAGCCCGGAT CGCGCGCTTC GCCGAGGAGC ACGGCTTTCT CGATCTGTCG CGCAGCAACT CCCGCCCCGC CATCGGCGAC GTCGTCCGCA TCGTGCCGAA CCACGTCTGC GTCGTCGTCA ATATGGTCGA CGAGGTGGTG ATGGTCCGCG GCGAGGAGAT TCTGGGAACG CTGCCCGTGG CGGCGCGGGG CAGACTGAAG TAA
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Protein sequence | MTTPLAARIA RDIGTPALVI DMDRVERNIA RVQALCDAAG VANRPHIKTH KSPLLAQMQI AAGARGITCQ KIGEAEVMAD AGIDDILISY NLIGEEKMAR LGALHARAEM VVAADNEVVI AGLPAAAARA GRPLGVVVEC DTGRARAGVE TPAEAIALAR SIAASDGLIF KGFMLYPTET GWPQAQRFFD EALAGIRAHG LDAAMVSTGG SPNLKNLGQL AGATEHRPGT YVYNDRMQVA AGVASWDDCA LTIYSTVVSR AAPERGILDA GSKTLTSDPG GGLDGFGLIL DHPEARIARF AEEHGFLDLS RSNSRPAIGD VVRIVPNHVC VVVNMVDEVV MVRGEEILGT LPVAARGRLK
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