Gene RPD_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2249 
Symbol 
ID4022734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2511096 
End bp2511560 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID637962444 
ProductMaoC-like dehydratase 
Protein accessionYP_569385 
Protein GI91976726 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.135818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAG AAGTCGAACG CGACGCGTAT ATGAAGATGG TCGGCACCGA GATCGGGGTG 
TCGGAATGGC ATGTTCTCGA CCAGAAGCGG ATCGATGCAT TCGCCGACTG CACCGAGGAC
TGGCAGTTCA TCCACGTCGA TCCCGAGCGC GCGGCGCGCG AGACACCGTT CGGCGCCTCG
ATCGCGCACG GCTTTCTGAC GCTGTCGATG CTGAGCGTGT TCTCCTACGA GGCGATGCCG
CGCATCAAGG GCGTGACGAT GGGCGTCAAT TACGGCTTCG ACCGGTTGCG GTTCATCTCG
CCGGTCAAGG CCGGCTCGCG GGTCCGCGGC CGCTTCATGC TGGCGGAAGC CACTCTGCGC
AAGCCGAACG AGTTGTTGTC GCGTACCAGC GTCAACGTCG AAATCGAGGG CGAGAAGCGC
TCGGCGCTGG TCGCCGACTG GCTCGGCCTG ATCTACTTCG CGTAA
 
Protein sequence
MSVEVERDAY MKMVGTEIGV SEWHVLDQKR IDAFADCTED WQFIHVDPER AARETPFGAS 
IAHGFLTLSM LSVFSYEAMP RIKGVTMGVN YGFDRLRFIS PVKAGSRVRG RFMLAEATLR
KPNELLSRTS VNVEIEGEKR SALVADWLGL IYFA