Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2235 |
Symbol | |
ID | 4022720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2498669 |
End bp | 2499433 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637962430 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_569371 |
Protein GI | 91976712 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.225457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCG CCACCAGGAA GATCGCAATC GTCACCGGAG CCGGCACCGG CGTCGGCCGC GCCGCATCGC TGGCGCTGAT GCAGATCGGC TTCACGGTGG TGCTCGCCGG CCGCCGGCTC GAACTGCTGC AGGAGACGCA GAAGCTCGGC GACGGCATCG GCGACAGTCT TCCCGTGCAG GCCGACATGG CCGATCCCGC CTCGATCGCA GCGCTGTTCG ACAAAACGGT CGCGAGCTAC GGCCGGCTCG ATCTGTTGTT CAACAACGCC GGCATGGGCG CGCCGCCGGT GCCGTTCGAG GATCTATCGC TGGCGCAGTG GCAGGCCGTG GTCGACACCA ACCTCACCGC GCCGTTTCTG TGCACCCAGC ACGCCTTCCG CATCATGAAG GATCAGAGCC CACGCGGCGG CCGCATCATC AACAACGGCT CGATCTCGGC GCACGCGCCG CGACCGTTCT CGGCGGCCTA CACCTCGACC AAGCACGCCA TATCCGGGCT CACCAAGTCG TCCAATCTCG ACGGCCGCGC CTATGATATC GCGGTCGGCC AGATCGATAT CGGCAACGCC GCCACCCCGA TGACCGACCG CATGGTCAGT GGCCCCGGCG TGCTGCAGCC GGACGGCTCG AGCAAGCAGG AGCCGCGGAT GGACGCGAAA GCGGTCGGCG ACGCCGTGGC CTACATGGCG GGCCTGCCGC TCGACGCCAA CGTGCTGTTC ATGACGGTGA TGGCGACCAA AATGCCGTTC GTCGGGCGGG GATAA
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Protein sequence | MASATRKIAI VTGAGTGVGR AASLALMQIG FTVVLAGRRL ELLQETQKLG DGIGDSLPVQ ADMADPASIA ALFDKTVASY GRLDLLFNNA GMGAPPVPFE DLSLAQWQAV VDTNLTAPFL CTQHAFRIMK DQSPRGGRII NNGSISAHAP RPFSAAYTST KHAISGLTKS SNLDGRAYDI AVGQIDIGNA ATPMTDRMVS GPGVLQPDGS SKQEPRMDAK AVGDAVAYMA GLPLDANVLF MTVMATKMPF VGRG
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