Gene RPD_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2225 
Symbol 
ID4022710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2490303 
End bp2490653 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content61% 
IMG OID637962420 
Producthypothetical protein 
Protein accessionYP_569361 
Protein GI91976702 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.525865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.528424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTACGAG CACCGCACCA AGGCCGCGCC GGGCTCAGCT CCCGCTATGG TATCGACAAG 
CTGGTCTGGT TTGAAATCTA CGACGATGTC GTCAGCGCCA TCACCCGTGA GAAACAATTG
AAGAAATGGC GCCGCGACTG GAAAGGTTCG CCTGATCGAG CAGGGCAATC CCGAGTGGGT
CGACCTCACC TTCGGTATTT CACATTGAGG CCAGGGGCTA TGGATTCCGG GCTCGCGCTC
CGCGCCCCCC CCGGAATGAC GAGAGGACAG GCGATGACCA AGATCAAGGA TCTGCACAAG
GCCTGGAGCA AGGCCCCGGC CTATCGGGCC GAGTGCGACG CGCTCGAGTA G
 
Protein sequence
MLRAPHQGRA GLSSRYGIDK LVWFEIYDDV VSAITREKQL KKWRRDWKGS PDRAGQSRVG 
RPHLRYFTLR PGAMDSGLAL RAPPGMTRGQ AMTKIKDLHK AWSKAPAYRA ECDALE