Gene RPD_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2118 
Symbol 
ID4022601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2370269 
End bp2370622 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content56% 
IMG OID637962312 
Producthypothetical protein 
Protein accessionYP_569254 
Protein GI91976595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00140399 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGGCAC CAACACATGA AGCATTTCTT CTTCGTCAGA AGATCAACTA CCTGCAGGCC 
CTGTTCGAGG GAGACTTCTC GTCGTCGTCT CCGGAGAGAG CCGCGCAAGA AGGACTGGCA
CGGCTCATCG CGAAAGCCGC TGGATGGAAG GCCGTCGGTT CTACCTACCA GCACGAAACG
AAAGGAAGCT ACCTGATCCG CGAGATGGAC GGATGGAGCG ACCTTTGCAT GATCGAATGC
CTAGCCGTAG AGGACTGGAT TGAGAAGATC ACTCCGCCGC CGCCGTTGCG TAACATCCTT
CCGATCTTGA GAGATCGAGA GAACTATCTC AACGGCAATG GGAGCGCGTC ATGA
 
Protein sequence
MMAPTHEAFL LRQKINYLQA LFEGDFSSSS PERAAQEGLA RLIAKAAGWK AVGSTYQHET 
KGSYLIREMD GWSDLCMIEC LAVEDWIEKI TPPPPLRNIL PILRDRENYL NGNGSAS