Gene RPD_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2090 
Symbol 
ID4022572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2341203 
End bp2341484 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content59% 
IMG OID637962283 
Productacyl carrier protein 
Protein accessionYP_569226 
Protein GI162138289 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA CATTCGATCG GGTGGCCACC ATCATCGCGG AAACCTGCGA CATCCCGCGC 
GATACCATCA CCCCGGAGAG CCACGCGATT GATGATCTGG GGATCGACAG CCTGGATTTT
CTCGACATCG CCTTCGCGAT CGACAAGGCG TTCGGTATCA AGTTGCCGCT GGAGAAATGG
ACCCAGGAGG TCAATGACGG CAAGGCGACC ACCGAGCAGT ATTTCGTGCT GAGCAACCTC
GCCGCGCGCA TCGACGAATT GGTCGCCGCC AAGGGCGCAT AG
 
Protein sequence
MTSTFDRVAT IIAETCDIPR DTITPESHAI DDLGIDSLDF LDIAFAIDKA FGIKLPLEKW 
TQEVNDGKAT TEQYFVLSNL AARIDELVAA KGA