| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2060 |
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| Symbol | nadE |
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| ID | 4022542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2308440 |
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| End bp | 2310197 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962253 |
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| Product | NAD synthetase |
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| Protein accession | YP_569196 |
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| Protein GI | 91976537 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.235816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA CAGCCGCCCG TTTGACGATC TCGCTCGCCC AGCTCAATCC GACGGTCGGC
GACATCGCCG GCAACGCCGC GATGGCGCGC GCCGCGCGCG CGCAGGCAGC CGCCGAGGGC
GCCGAGCTTG TTGTCTTTCC CGAATTGTTC ATTTCCGGCT ATCCGCCGGA AGATCTGGTA
TTGAAGCCGG CGTTTCAGAC GGCCTGCCGC GCGGCGGTCG AAGACCTCGC GCGCGAGACG
GCGGACGGTG GACCGGCGAT GCTGATCGGC TCGCCATGGC TCGACGGCGG CAAGCTCTAT
AACGCCTGCG CGCTGCTCGA CGGCGGCCGG ATCGCTGCGA TCCGCACCAA GGTCAATCTG
CCGAATTACG GCGTGTTCGA CGAGAAGCGG GTGTTTTCAC GTGGCCCCGT CTCCGGTCCG
ATGACCATCC GCGGAGTGCG CGTCGGCGTG CCGATCTGCG AGGACACCTG GCTCGAGGAG
TCCGAGGATT ACGAGAACGT CGTCGAATGT CTCGCCGAGA CCGGCGCCGA AATCCTGATC
GTGCCGAACG GCTCGCCCTA TGCGCGCGGC AAAAGCGATC TGCGGCTGTC GGTGCAGGTC
GCGCGGGTGA CCGAGAGCGA TCTGCCGCTG GTCTATCTCA ACCAGGTCGG CGGGCAGGAT
GAGCTGGTGT TCGACGGCGC GTCGTTCGTG CTCAATGCCG ACCGATCGCT CGCGGCGCAA
TTGCCGGCAT TCGCCGAGTC CATCACCACT CTGCATTGGC AGAAGGGGGC ATCGGGCTGG
CGCTGCGACG GTCCGGTGGC GCCGACGCTC GACGGCGACG AGGGCGACTA CGCCGCCTGC
GTGCTGGGCC TCCGCGACTA CGTCCGCAAG AACGGCTTTC CGGGCGTGCT GCTCGGGATT
TCCGGCGGCA TCGACTCTGC GCTATGCGCG GCGATCGCGG TCGATGCGCT CGGCGCCGAC
AAGGTGCGCG GCGTGATGCT GCCGTTTCGC TACACCGCGC AGATCTCGCT CGATGATGCG
GACGGGCTCG CGCGTGCGCT GGGGTTTGGT TACGAGGTGC TGCCGATCGC CGCCGCGGTC
AACGGCTTCG AGGACATTCT GGCGAAGCCG TTCGCCGGCC TCGAGCGAGA TATCACCGAA
GAGAATCTGC AGGCGCGCAC CCGCGGTACG CTGTTGATGG CGATCTCGAA CAAGACCGGC
GCGATGGTGG TGACCACCGG CAACAAGTCG GAAATGTCGG TCGGCTACGC CACGCTGTAT
GGCGACATGA ACGGCGGCTT CAATCCGATC AAGGACATCT ACAAGACGGA AGTGTTTCGG
CTGTCCAGCC TGCGCAATCG TTGGAAGCCG GACGGTGCGC TCGGCCCCGA CGGCGAGGTG
ATTCCGGAGA GCATTATCGT GCGGCCGCCG ACTGCGGAGC TGCGTGAAAA CCAGACCGAC
CAGGATTCGC TGCCGCCCTA CGAGGTGCTC GACGCCATCC TGGAAAGGCT GGTCGAGCGC
GAGGAGCCGC TGGCGACAAT CGTCGCCGAA GGCTTCGACC GTGACACCGT GGTGCGGATC
GATCGGCTGC TGAACATCGC CGAATACAAG CGCCGCCAGG CCGCGCCCGG CGTGAAGGTG
ACGCGCAAGA ATTTCGGCCG CGATCGCCGC TATCCGATCA CGAACCGCTT CCGCGACAAG
GCGGAGCCCT TGCCCGCGCC GGACGAAACG CTGCTGATCC GCGCCAATCG GGCGTCGAGT
GAGGCGTTCG AGCGGTAG
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| Protein sequence | MTDTAARLTI SLAQLNPTVG DIAGNAAMAR AARAQAAAEG AELVVFPELF ISGYPPEDLV
LKPAFQTACR AAVEDLARET ADGGPAMLIG SPWLDGGKLY NACALLDGGR IAAIRTKVNL
PNYGVFDEKR VFSRGPVSGP MTIRGVRVGV PICEDTWLEE SEDYENVVEC LAETGAEILI
VPNGSPYARG KSDLRLSVQV ARVTESDLPL VYLNQVGGQD ELVFDGASFV LNADRSLAAQ
LPAFAESITT LHWQKGASGW RCDGPVAPTL DGDEGDYAAC VLGLRDYVRK NGFPGVLLGI
SGGIDSALCA AIAVDALGAD KVRGVMLPFR YTAQISLDDA DGLARALGFG YEVLPIAAAV
NGFEDILAKP FAGLERDITE ENLQARTRGT LLMAISNKTG AMVVTTGNKS EMSVGYATLY
GDMNGGFNPI KDIYKTEVFR LSSLRNRWKP DGALGPDGEV IPESIIVRPP TAELRENQTD
QDSLPPYEVL DAILERLVER EEPLATIVAE GFDRDTVVRI DRLLNIAEYK RRQAAPGVKV
TRKNFGRDRR YPITNRFRDK AEPLPAPDET LLIRANRASS EAFER
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