| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2049 |
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| Symbol | |
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| ID | 4022531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2297338 |
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| End bp | 2298426 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637962242 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_569185 |
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| Protein GI | 91976526 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.207546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC GTGACTTTCT GAAAGTATCA GCAACCGGCG CCGCGGTCGC GGCGGTGGCC
TCGCCGGCGA TCGCTCAGTC GTCTCCCGAG GTGAAGTGGC GGTTGACCTC GAGCTTCCCG
AAGTCTCTCG ACACGATCTA TGGCGGTGCG GAATATCTCG CGAAGCAGGT CGCCGAGATG
ACCGACAACA AATTCCAAAT CCAGGTGTTC GCCGCCGGCG AAGTGGTTCC GGGTCTGCAG
GCGCTCGACG CCACGTCGAA CGGCACCGTG GAGATGAGCC ACACGGTTTC CTACTACTAT
GTCGGCAAGG ATCCGACCTT CGCGGTGTTC GCGTCGGTGC CGTTCGGTCT CAACGCGCGG
CAGCAGAACT CGTGGCTGTA TCAAGGCGGC GGCAACGAAC TGGCCAACGA ATTCTACAAG
AAGCACGGCG TGGTCGGCTT CCCCTGCGGC AACACCGGCA CCCAGATGGG CGGTTGGTTC
CGTAAGGAAA TCAAGACCGT CGCAGACATG TCGGGCCTGA AGATGCGGAT CGGCGGCATC
GCCGGTCAGG TGCTGCAGAA GGTCGGCGTT GTGCCGCAGC AGATCGCCGG CGGCGACATC
TATCCGGCGC TGGAAAAGGG CACCATCGAC GCGGCCGAAT GGGTCGGCCC CTATGACGAC
GAGAAGCTCG GCTTCCAGAA GGTCGCGAAG TACTATTACT ATCCGGGCTT CTGGGAAGGC
GGCCCGACCG TGCATGCCTT CGCGAACCTC GAAAAGTTCA ATGCGCTGCC GAAGAACTAT
CAGTCGATCC TGGCCAACGC CGCCGAGTCA ACCAACACCT GGATGGCGGC ACGCTATGAT
ATGCAGAATC CGACCGCGTT GAAGCGACTG GTGGCGAGCG GCACGCAGCT GCGTCCGTTC
TCCAACGAAA TCCTCGATGC CTGCCTCAAG GCCACCAACG AGCTGTGGGG CGAAATCTCG
GCGAAGAACG CCGACTTCAA GAAGGCGATC GACGCGATGC AGGCCTATCG CTCCGACCAG
TATCTGTGGT GGCAGGTCGC CGAATACACT TACGACAGCT TCATGATTCG CTCGCGCACC
CGCGGCTGA
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| Protein sequence | MKRRDFLKVS ATGAAVAAVA SPAIAQSSPE VKWRLTSSFP KSLDTIYGGA EYLAKQVAEM
TDNKFQIQVF AAGEVVPGLQ ALDATSNGTV EMSHTVSYYY VGKDPTFAVF ASVPFGLNAR
QQNSWLYQGG GNELANEFYK KHGVVGFPCG NTGTQMGGWF RKEIKTVADM SGLKMRIGGI
AGQVLQKVGV VPQQIAGGDI YPALEKGTID AAEWVGPYDD EKLGFQKVAK YYYYPGFWEG
GPTVHAFANL EKFNALPKNY QSILANAAES TNTWMAARYD MQNPTALKRL VASGTQLRPF
SNEILDACLK ATNELWGEIS AKNADFKKAI DAMQAYRSDQ YLWWQVAEYT YDSFMIRSRT
RG
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