Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2021 |
Symbol | |
ID | 4022503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2266957 |
End bp | 2267952 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962214 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_569157 |
Protein GI | 91976498 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.01256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.586253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA CGCGTTTTAC CGAAACATTC GGCATCCAGC ATCCGATCGT CCAGGGCGGG ATGCAGTGGG TCGGCCGCGC CGAACTCGTG GCCGCTATCG CCAATGCCGG CGCGCTCGGC ATGATCACCG CGCTGACGCA GCCGACGCCG GAGGATCTCA CCAAGGAGAT CGCGCGCTGC CGTGACCTCA CCGACAAGCC GTTCGGCGTC AACCTCACGA TCCTGCCGGC GATCAAGCCG CCGCCTTATG CGGAGTATCG TCAGGCGATC ATCGAGAGCG GCGTCAGGAT CGTCGAGACC GCGGGCAACA AGCCGCAGGA GCACGTCGAG GAATTCAGAA AGCACGGCGT CAAGGTTCTG CACAAATGTA CCAGCGTCCG CCACGCGCTG TCGGCGGAGC GGATGGGCGT CGACGGCATT TCGATCGACG GTTTCGAATG CGCCGGCCAC CCGGGCGAAG ACGATACGCC CGGCCTGATC CTGATCCCCG CCGCCGCCGA CAAGATCAAG GTCCCGATGA TCGCCTCGGG CGGCTTCGCC GATGGGCGCG GCCTGGTCGC GGCGCTGGCG CTCGGCGCCG ACGGCATCAA CATGGGCACG CGATTCATGT GCACCAAAGA GAGCCCGATC CATCAGGCGG TGAAGGAAAA GATCGTCGCC AATGACGAGC GCTCGACCGA CCTGATCTTC CGCACCATGC GCAACACCTC GCGCGTCGCG AAGAACGCGA TCAGCCAGCA GGTGATCGAG CTAGAGAAGC AGGGCGCGAC CTTCGAGCAG GTCCGCGAAC TGGTCGCCGG CGCCCGCGGC AAGATGGTCT ACGCTACCGG CGACACCGAT GAAGGCGTGT GGTCGGCCGG TCAGGTCCAG GGACTGATTC ATGACATTCC GAGCTGCGCC GAGCTGGTGT CGCGGATCAT GCGCGACGCC GAGGCGATCA TTCGTGCGCG GCTCGAAGCG ATGCTGTCGG GCGGCCAGCG CGAAGCCGCC GAATGA
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Protein sequence | MIKTRFTETF GIQHPIVQGG MQWVGRAELV AAIANAGALG MITALTQPTP EDLTKEIARC RDLTDKPFGV NLTILPAIKP PPYAEYRQAI IESGVRIVET AGNKPQEHVE EFRKHGVKVL HKCTSVRHAL SAERMGVDGI SIDGFECAGH PGEDDTPGLI LIPAAADKIK VPMIASGGFA DGRGLVAALA LGADGINMGT RFMCTKESPI HQAVKEKIVA NDERSTDLIF RTMRNTSRVA KNAISQQVIE LEKQGATFEQ VRELVAGARG KMVYATGDTD EGVWSAGQVQ GLIHDIPSCA ELVSRIMRDA EAIIRARLEA MLSGGQREAA E
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