Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2018 |
Symbol | |
ID | 4022500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2261930 |
End bp | 2264245 |
Gene Length | 2316 bp |
Protein Length | 771 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962211 |
Product | ATP-binding region, ATPase-like |
Protein accession | YP_569154 |
Protein GI | 91976495 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.88254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.468508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCG TGCAGGCGGC GAACGCTTGC GTTCAATCCG ATTCAATCAA GGGATTGGCG CAATCGATCG CTAAACCGGC CTACCATCGG CTGCTGACGG CCGAGCCGGT GCTCCGCCGC GCCGTCCCGA TCCTGATCAT CGCTTTCCTC GTGACCATCT GCTTCGGCGC CGCGGTTCAG GTCATCGACC AGAGCCGGCA GAAGCGCGCC GCGCTCAATC GCGACCTCTC CGCACTCGCC GACCTGCTCG CGGAACGGCT CGAACATATC GGTGTGGTGC GGCTCGACCG CGCGGCGTCG ATCGAACGCC TGCAGAGCCT GCTACCCGGC CTCGTTCCAT CGTGGGGCAT CGCCGCGGGA CGGCATGTCA TCGTCACCGG CGCCGATCAA CGCGTGCTGG CGCGGGTGCC GGGCGATGAA GGCGCCAGCG CCGCCAACAG ATTCCTCGAC ATCATCAGCG CCACGCCGAC GCTGACGAAG TCCTCACAGC AAGGCGTCCT CAGCGAGATC ACCTTGCCGA GCGGCGCCTC GGCGCTGGCG ACGCTGCACA CCATCAAGTC GTTGCCGGGC CAGGTCATCA TCATCCAGGA AGATACCGGC TCGATCCTGC GCTCCGATGC GGCGCTGCAG ATCACCCTGT CGGCCACCAC CGGCTTCGTC GTGCTGATCC TCGGCTTCGC CTTCCACTGG CAGTCGACCC GCGCGCGCGA AGGCGACCTG ATCAACGACG CGGTGCGCAG CCGGATCGAC ACCGCGCTCA ATCGCGGCCG CTGCGGCCTG TGGGATTGGG ACCTGTCGCG CGGCCGGATC TTCTGGTCGC AGTCGATGTT CACCCTGCTC GGCCTGGAGA GCCGCAACGA CCTCCTGACC TTCGGCGAGG TCAACGCGCT CGTGAACAGC GACGACATCG ACCTGTTCAC GATCGGCGAC GAACTGATCG CCGGCGCCGC CGATCACATC GACCACAGCT TCCGGATGCG GCACGCCAAC GGTCACTGGA TCTGGCTGCG GATGCGTTGC GAGCTCAGCC AGGAATCGCC CACCGAAAAC AAGCATCTGA TCGGCATCGC GGTCGACGTC ACCGAACAGA AGAGCCTCGC CGAACGCACC GTCGAAGCCG ATCTGCGGCT GCGGGACGCG ATCGAAACCC TGCCCGAGGC GTTCGTGCTG TGGGACTCCG ACAACCGACT CGTGCTGTGC AACTCGCACT TCCAGCGGCT GCACAAGCTG CCGGATTCCG CGATTGCGCC CGGCACGTCC TATGAGACGG TGATCGAGGT CGGGCAGATG CCGGAAATCC GCACCCGGCA ATGCGACGTC GGCGCGGGGT CGCCACCCGG CGCGCGCACC TTCGAGGCCC AACTCGACGA CGGAAGCTGG CTGCACATCA GCGAACGCCG CACCAAGGAC GGCGGCTACG TCGCCGTAGG CACCAACATC ACCCGCATCA AGGCGCACGA GCAGAAGCTC GTCGACAACG ATTTGCGGCT TCGCGCAACC GTCGCCGACC TGAAAATCTC GCAGGTCAAG CTGGAGCGCC AGGCGATCGA GCTCGCCGAT CTCGCGCGAA AATACTCCGA GGAAAAAAAC CGGGCCGAAG AAGCCAACCA GGCCAAGTCG AAATTCCTCG CTAATATGAG CCACGAGCTG CGCACGCCGC TCAACGCGAT CATCGGCTTC TCGGAGATTA TGGGCAGCGG CATGTTCGGC ACGCTGGGCT CGGAGAAGTA TCAGGAATAC TGCCACGACA TCATGACCAG CGGTCACTAT CTGCTGGAGG TGATCAACGA CATTCTCGAC ATGTCGAAGA TCGAGGCCGG CCGCATGCGG CTCGAGATGG AGGAGCTCGA TCTCGCCCGA ACGCTTGGCG AATCGCTCAA GGTCGTCGCC GGTCGCGCCG ACAACAAGCA TCTCGAGCTT CGCGCCGAAA TCGAGGACGG CATCCCGATC GTGGCGGATC GCCGCGCGAT CAAGCAGATT CTGATCAACC TGTTGTCGAA CGCCGTGAAA TTCACCCCCG ACGGCGGGCG GGTGACGGTG CGCAGCCGGA CGCTGGAAGA TTCGATCGTG ATGATGATCG CCGATTCAGG CATCGGCATC GCCCCGCAAT CGCTGCGAAG GCTCGGACAG CCGTTCGAGC AGGTCGAGAG CCAGCTCACC AAGACCTATC ACGGCTCCGG GCTGGGTCTG GCGATCGCCA AGTCGCTCAC CAGGCTGCAT GGCGGCTCGA TGCGTCTGCG CTCGACGCTC GGCGCCGGAA CGGTGGTGAT GGTCACGCTG CCGCGCGACT GCCAGAAGCG CCGGATGGCG GCCTGA
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Protein sequence | MARVQAANAC VQSDSIKGLA QSIAKPAYHR LLTAEPVLRR AVPILIIAFL VTICFGAAVQ VIDQSRQKRA ALNRDLSALA DLLAERLEHI GVVRLDRAAS IERLQSLLPG LVPSWGIAAG RHVIVTGADQ RVLARVPGDE GASAANRFLD IISATPTLTK SSQQGVLSEI TLPSGASALA TLHTIKSLPG QVIIIQEDTG SILRSDAALQ ITLSATTGFV VLILGFAFHW QSTRAREGDL INDAVRSRID TALNRGRCGL WDWDLSRGRI FWSQSMFTLL GLESRNDLLT FGEVNALVNS DDIDLFTIGD ELIAGAADHI DHSFRMRHAN GHWIWLRMRC ELSQESPTEN KHLIGIAVDV TEQKSLAERT VEADLRLRDA IETLPEAFVL WDSDNRLVLC NSHFQRLHKL PDSAIAPGTS YETVIEVGQM PEIRTRQCDV GAGSPPGART FEAQLDDGSW LHISERRTKD GGYVAVGTNI TRIKAHEQKL VDNDLRLRAT VADLKISQVK LERQAIELAD LARKYSEEKN RAEEANQAKS KFLANMSHEL RTPLNAIIGF SEIMGSGMFG TLGSEKYQEY CHDIMTSGHY LLEVINDILD MSKIEAGRMR LEMEELDLAR TLGESLKVVA GRADNKHLEL RAEIEDGIPI VADRRAIKQI LINLLSNAVK FTPDGGRVTV RSRTLEDSIV MMIADSGIGI APQSLRRLGQ PFEQVESQLT KTYHGSGLGL AIAKSLTRLH GGSMRLRSTL GAGTVVMVTL PRDCQKRRMA A
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