Gene RPD_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1981 
Symbol 
ID4022463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2219157 
End bp2219486 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content71% 
IMG OID637962174 
Producthypothetical protein 
Protein accessionYP_569117 
Protein GI91976458 
COG category[R] General function prediction only 
COG ID[COG5614] Bacteriophage head-tail adaptor 
TIGRFAM ID[TIGR01563] phage head-tail adaptor, putative, SPP1 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.50206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC CGGGCCGCTT GAACACACGG TTGACGCTCG AGACGCCGGT CGAAAGCGGC 
GACGGGCAGG GCGGCGTGGT GCGCAGCTTC GCGCCGCAGA ATGTGGTGTG GGCGCAGCTC
GCGCCGCGCG CCGCGCGCGA GGGCGTCACG GCGGACGCCG ACGGCGCGGT GCTGCGCATC
ACGATCACGC TGCGCGGCGG CGTCGCGCTG ACGCGGGCGC ATCGGCTGGT CGACGGCGCG
CGGATCTATC GCATCATCGC CTGGCGCGAG CGTGATCACG GCGCGCTGAT CGAGATCGAC
GCGGAGCTTC ATCAGTCACC GTCATCCTGA
 
Protein sequence
MIDPGRLNTR LTLETPVESG DGQGGVVRSF APQNVVWAQL APRAAREGVT ADADGAVLRI 
TITLRGGVAL TRAHRLVDGA RIYRIIAWRE RDHGALIEID AELHQSPSS