Gene RPD_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1928 
Symbol 
ID4022410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2165945 
End bp2166409 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID637962121 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_569064 
Protein GI91976405 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0516617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CCGGCAAACC GGTGCTCACC GGCGGCTGCC AGTGCGGCGT GATCCGCTAT 
GCACTCAGCG CGCCGCCGCT ACGGGTCACG CTGTGCCACT GCCGGATGTG CCAGAAAGCG
ACCGGCGCCC CGTTCGCGTC GATGGCCGAA GTCGCCCGCG AGCACTTCGC CTGGACCCAC
GGCAAGCCGG CGTCGTTCAA ATCCTCGTCG CTGGCCGAGC GCGACTTCTG CAAGGCCTGT
GGCACGCCGC TGAGCTATCG TCAGAACGAC GGCACGAGCA TCGAGATCAT GACCGGAACG
TTCGACCGGC CCGACCGCGT GGTTCCGACC GTGCAACTCG GCGCCGAGTC TCGGCTGGGC
TGGGTCGGCG CGATCGCGAA CCTGCCGAGC AAGACGACGT TGCAGATTTA CGGAGCCGAG
AAGCTGTCCC AGGTGTTCAG CTATCAGCAG CCGGACCATG ACTGA
 
Protein sequence
MTATGKPVLT GGCQCGVIRY ALSAPPLRVT LCHCRMCQKA TGAPFASMAE VAREHFAWTH 
GKPASFKSSS LAERDFCKAC GTPLSYRQND GTSIEIMTGT FDRPDRVVPT VQLGAESRLG
WVGAIANLPS KTTLQIYGAE KLSQVFSYQQ PDHD