Gene RPD_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1908 
Symbol 
ID4022390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2145972 
End bp2146751 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID637962101 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_569044 
Protein GI91976385 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATT TTGAATTCAT CATCGTCGAG CGCCAGAACG CAGTCGGCAT CATCAAGCTT 
AACCGTCCGA AGATGCTCAA CGCGCTGTCG TTCGGCGTGT TCGGCGAGAT CGGCGCGGCG
GTCGAGGACC TCGAAGCCGA CGATGCGATC GGATGCATCC TGATCACCGG CAGCGAGAAG
GCGTTCGCCG CCGGCGCCGA CATCAAGGAG ATGCAGCCGA AAGGCTTCAT TGACATGTTC
AACGAGGACT TCACCTCGAT CGGCGGCGAC CGTTTGGCCC GTTGCCGCAA GCCGACCATC
GCCGCGGTCG CAGGTTACGC GCTCGGCGGC GGCTGCGAAC TCGCGATGAT GTGCGACATC
ATCATTGCGG CCGACAACGC GAAGTTCGGC CAGCCTGAAA TCACCCTGGG AACGATTCCG
GGTATCGGAG GTACTCAGCG ACTCACCCGT GCGATCGGCA AGTCGAAGGC GATGGATCTT
TGCCTCACCG GTCGAATGAT GGACGCGCAG GAAGCCGAAC GCGCCGGCCT CGTCAGCCGT
CTCGTGCCGG CCGACAAGCT GATGGAAGAG GCGCTCGCCG CCGCCGAGAA AATCGCATCG
ATGTCGCGCC CCACAGCTGC GATGGCGAAA AGCGCCGTGA ACCGTGCGCT GGAAACCACG
CTGGCCGAGG GCCTCGCGAT CGAACGCGAT CTCTTCCGCT CGACCTTCGC ACTGGAAGAT
CGCTCCGAAG GCATGGCCGC GTTCATCGAA AAGCGCAAAC CGAACAACAA GAACCGCTGA
 
Protein sequence
MSNFEFIIVE RQNAVGIIKL NRPKMLNALS FGVFGEIGAA VEDLEADDAI GCILITGSEK 
AFAAGADIKE MQPKGFIDMF NEDFTSIGGD RLARCRKPTI AAVAGYALGG GCELAMMCDI
IIAADNAKFG QPEITLGTIP GIGGTQRLTR AIGKSKAMDL CLTGRMMDAQ EAERAGLVSR
LVPADKLMEE ALAAAEKIAS MSRPTAAMAK SAVNRALETT LAEGLAIERD LFRSTFALED
RSEGMAAFIE KRKPNNKNR