Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1895 |
Symbol | |
ID | 4022377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2127302 |
End bp | 2129026 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962088 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_569031 |
Protein GI | 91976372 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.49823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.375408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGAAC TAATTCGCGA CATCACGCTG TGCATCCTGT TCGCCTGGAT GCTTGGGCTG TCGGCGCATT TTTTCCGTCA GCCACTGATC CTCGCCTACC TTATCGCCGG CTTTGCGATC GGTCCATTCG GCCTCGGTCT GGTGCGATCG CAGGACTCGA TCTCGGTGAT CTCCGAGCTC GGTTTGATCT TCATGCTGTT CATGATCGGA CTCGAGATCG ACCTGAAGAA GGTCGTCCGC GCCGGCAGCG TGATTCTGGT CGCCGCCGGC GGACAGTTGA TCGGCGGATG CCTGCTCGGC CTCGCGTTCT TCTTCGGCAT CGGCCTGTCG ATCGGCGGCG GACAGTTCGA CGCGGTCTAT CTCACCGTCG CCTGCGCGCT GTCCTCCACC GTCATCATCG TCAAGGTGCT GTACGAAAAG CGCGAGCTCG ACACCCTGCC CGGCCGGCTC ACGCTCGGCG TGCTGGTGCT GCAGGACATC TTCGCGATCC TGTTCCTGGC GGTGCAGCCG AGCCTCGCCG ATCTGCAGGT CAGCGTGCTG CTGCTGTCGA TCGGCCGCGT CGCCATGCTG GTTGCCACGG CTCTGGTGCT GAGCCGCTAC GTGCTGCCCT GGCTGTTCCA CCGCATCGCG CGCACGCCGG AGCTTGTGCT GCTCGGCGCG CTGGCGTGGT GCTTCCTGAT CGGCGAGATC GCCGAGCGGC TGCATCTGTC GCGCGAGATG GGATCGCTGG TCGCCGGCGT GTCGCTGTCG ACCTTCCCCT ATGCGCTCGA CGTCACCGCC AAGGTGACGA CACTGCGGGA CTTCTTCATC ACGCTGTTCT TCGTCGCGGT CGGCATGACG ATCCCGATCC CGAACGGGTC GGTGATCATG CTGGCGCTGG CGATCGCCGC CTTTACAGTG GTCAGCCGGG TCGTCACCAC CTTCCTGCCG CTGTATCTGA TGCGCCAAGG CCTGCGCGCC AGTCTGCTGC CGGCGCTGAA CCTGGCGCAG ATTAGTGAGT TCTCGCTGGT GGTGATCCAG ACCGGCATCG CCGCCGGCCA CATCCGCACC GAGACCGCGA GCGCCGCGTC GTTCGCCTTC GTGTTGCTGG CGGTGCTGTC GACCTTCGTC ATGGTGCGCA GTGATCCGAT CACCCGCCGC GCGATCCGCT TGCTGAAGGC GCTCGGCCTG CGCGATCTCG ACCACAGAGC GGCCGATCCC GAGGACGAGG CCAGCCACGG CGCGGTGCGT CGGATCGTGA TCCTCGGCTT CTTCCGCGCC GCCAGCGCGC TGATCAGCGA GATTGAGCGG CAGAACGAGG AGCTGTTGAA GCAGATCAGC GTGATCGACT TCAATCCAAA CGTCTATCGC ACCCTCGTCG CGCGCGGCAT GCACGTCATC TACGGCGACA TCAGCAGTGC CGACACGTTG CTGCACGCCG GCGTCGGAAA GGCCGAGATC ATCATCCTCA GCGTGCCGGA TTCGCTCTTG AAAGGCGCGA CCAACGAGCG GCTGGTGCGC CACGTCCGGG CGCTCAATCC GACCGCGCGG ATCATCGCAA CCGCGGATCT TCTGGCGGAT GTCGCTACGC TATACGCGGC CGGCGCGAAT TACGTCACGG TGACCCGGAT CAGCGACGCA AACGAATTGT TCAGCGCGAT CGAGGCCGCC GATAACGGCC TGCTCGACGA CAAGCGGGTC GCGTTCGACG CCCGCCTCGC CGAACGGCGC GAAGTGTTGC CGTAG
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Protein sequence | MHELIRDITL CILFAWMLGL SAHFFRQPLI LAYLIAGFAI GPFGLGLVRS QDSISVISEL GLIFMLFMIG LEIDLKKVVR AGSVILVAAG GQLIGGCLLG LAFFFGIGLS IGGGQFDAVY LTVACALSST VIIVKVLYEK RELDTLPGRL TLGVLVLQDI FAILFLAVQP SLADLQVSVL LLSIGRVAML VATALVLSRY VLPWLFHRIA RTPELVLLGA LAWCFLIGEI AERLHLSREM GSLVAGVSLS TFPYALDVTA KVTTLRDFFI TLFFVAVGMT IPIPNGSVIM LALAIAAFTV VSRVVTTFLP LYLMRQGLRA SLLPALNLAQ ISEFSLVVIQ TGIAAGHIRT ETASAASFAF VLLAVLSTFV MVRSDPITRR AIRLLKALGL RDLDHRAADP EDEASHGAVR RIVILGFFRA ASALISEIER QNEELLKQIS VIDFNPNVYR TLVARGMHVI YGDISSADTL LHAGVGKAEI IILSVPDSLL KGATNERLVR HVRALNPTAR IIATADLLAD VATLYAAGAN YVTVTRISDA NELFSAIEAA DNGLLDDKRV AFDARLAERR EVLP
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