| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1889 |
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| Symbol | |
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| ID | 4022371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2119225 |
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| End bp | 2120382 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962082 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_569025 |
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| Protein GI | 91976366 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.808445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.559234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGT TCAAGCTGTC CGTCGCGGCG TTCGCCGTGG CGATCGCACT GCCGGCGCTG
TCCGGCGCCG CGCTCGCAGA AACCAATGAA ATCACGGTGG GCATCAGCGT CACCACCACG
GGTCCTGCCG CCGCGCTCGG CATTCCGGAG CGCAATGCGC TGGAATTCGT GGTGAAGGAA
ATCAGCGGTC ATCCGATCAA GATCATCGTG CTCGACGATG GCGGCGACCC GACCGCCGCG
ACCACCAATG CGCGACGTTT CGTCACGGAA TCGAAGGCCG ACGTGATCAT GGGCTCGTCG
GTCACGCCGC CGTCGGTGGC GATCTCGAAC GTCGCCAACG AGGCGCAGAT TCCGCATATC
GCGCTCGCGC CGCTGCCGAT CACGCCGGAA CGCGCCAAGT GGTCGGTGGT GATGCCGCAG
CCGATCCCGA TCATGGGCAA GGTGCTCTAT GAGCACATGA AGAAGAACAA CGTGAAGACC
GTTGGCTACA TCGGCTATTC GGATAGCTAC GGCGACCTTT GGTTCAATGA TCTCAAGAAG
CAGGGCGAGG CGATGGGCCT CAAGATCGTC GGCGAGGAGC GCTTCGCGCG GCCCGACACG
TCGGTCGCGG GCCAGGCGCT GAAGCTCGTT GCCGCCAATC CCGACGCGAT CCTGGTCGGC
GCGTCCGGCA CCGCCGCAGC GCTGCCGCAG ACCACGCTGC GTGAGCGAGG TTATAACGGG
CTGATCTATC AGACCCACGG CGCCGCTTCG ATGGATTTCA TCCGGATCGC CGGCAAGTCC
GCGGAGGGCG TGCTGATGGC GTCGGGTCCG GTGATGGATC CGGAAGGACA GGACGACACG
GCGCTGACGA AGAAGCCCGG CATGGCGCTG GTGAAGGTCT ATGAGGAAAA GTACGGCCCG
AGCAGCCGCA GCCAGTTCGC GGGCCACTCC TACGACGCCT TCAAGGTGCT GGAGCGCGTG
GTCCCGGTTG CGCTGAAGAA GGCCAAGCCC GGCACGCAGG AATTCCGCGA GGCGCTCCGT
GAAGCGTTTC TCACTGAGAA GGACATCGCG GCGAGCCAGG GCGTGTACAA TTTCACCGAA
ACCGATCGCT ACGGCCTCGA CGACCGTTCG CGCATCCTGC TGACGGTGAA GAACGGCAAG
TATGTGATCG TGAAGTAA
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| Protein sequence | MTKFKLSVAA FAVAIALPAL SGAALAETNE ITVGISVTTT GPAAALGIPE RNALEFVVKE
ISGHPIKIIV LDDGGDPTAA TTNARRFVTE SKADVIMGSS VTPPSVAISN VANEAQIPHI
ALAPLPITPE RAKWSVVMPQ PIPIMGKVLY EHMKKNNVKT VGYIGYSDSY GDLWFNDLKK
QGEAMGLKIV GEERFARPDT SVAGQALKLV AANPDAILVG ASGTAAALPQ TTLRERGYNG
LIYQTHGAAS MDFIRIAGKS AEGVLMASGP VMDPEGQDDT ALTKKPGMAL VKVYEEKYGP
SSRSQFAGHS YDAFKVLERV VPVALKKAKP GTQEFREALR EAFLTEKDIA ASQGVYNFTE
TDRYGLDDRS RILLTVKNGK YVIVK
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