| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1871 |
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| Symbol | |
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| ID | 4022353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2094920 |
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| End bp | 2096494 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962064 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_569007 |
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| Protein GI | 91976348 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.394568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.852293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG GCGAGCTCAC CCAAAGCCAT ATCACCCAAG GCCATCTCTC TCACGGCATC
GTCAGTGGCG ACCGCCATCG GTCGTTCGAG GAGGTCAATG CGCGCGCCGC GCAGATCGCC
GGCGGGCTGC AGGGCCTTGG CGTCAAACCC GGCGATTGCG TTTGCGTCTT GATGCGCAAC
GACATCGCCT TTCTTGAATC CGCCTATGCG GTCATGATGC TCGGCGCCTA CATGGTCCCG
GTGAACTGGC ACTTCAAACC AGAAGAGGTT CTCTACGTGC TGGGCGATTC CGGCACGCGC
GTTTTGATCG GCCATGCCGA TCTGCTGCAC CACGCGGCTG GAATCGTGCC CGCAGCCGTC
ACGATGCTGA GCGTGCCGAC GCCGCCGGAA ATCCTCGCGA GCTACAGCAT CGATCCCGAC
CATCGCTCGG CTCCCGCCGG CGCGATCGAT CTCGACGGCT GGCTCGCGCA GCAGAGGCCA
TATGACGGCC CGGCGCTGCC GCAGCCGCAG AACATGATCT ACACCTCGGG CACCACCGGC
CATCCGAAGG GCGTCAAACG GTTCGCGCCG ACGCCGCAAC AGTCGGCGAA CGCCGAAGCC
ATGCGCGCAG CGATCTACGG CCTGAAGCCG GGCGTCCGCG CGCTGTGCCC GGGGCCGTTG
TATCACTCCG CGCCGAATTC GTTCGGCATT CGCGCCGGCC GGCTCGGCGG AGTGCTGGCG
CTGATGCCGC GGTTCGAACC CGAAGCGCTG CTGCAACTGA TCGAGCAGCA CCGGATCGAC
ACCGTGTTCA TGGTGCCGAC GATGTTCATC CGGCTGATGA AGCTGCCGGA AGCGGTGCGC
AACAAGTACG ACGTGTCGTC GCTGCGCCAT GTCATCCATG CCGCGGCGCC GTGTCCCCCG
GACGTCAAGC GCGCGATGAT CGACTGGTGG GGGCCGGTGA TCTACGAATT CTACGGCTCG
ACCGAGAGTG GCGCGGTGAC GTTCGCGAGC TCCGAGGATG CGCTGAAGAA GCCCGGCACC
GTCGGCAAGA TCGCTGCCGG CGCCGAGCTT GTGTTCGTCG ACGACGACAA TAACGAGGTG
CCGCAGAGCG AGGTCGGCGA GATCTTCTCG CGGATCCCCG GCAATCCGGA TTTCACCTAT
CACAACAAGC CGGAGAAACG CGCGGAGATC GACCGGGGCG GCTTCATCAC CTCGGGCGAC
ATGGGCTATC TCGACGAGGA CGGCTACGTC TTCATCTGCG ACCGCAAGCG CGACATGGTG
ATCTCCGGCG GCGTCAACAT CTATCCAGCC GAGATCGAGG CGGCGCTGCA CGCGATCCCG
GGTGTGCACG ACTGTGCGGT GTTCGGGATT CCCGACGCCG AATTCGGCGA GGCGCTGATG
GCGATGCTCG AGCCGCAGCC TGGCGTCACA CTGGAGCAGA GCAATATCCG CGAGCAGCTC
AGGCTGTCGC TCGCCGGCTA TAAGGTTCCG AAGCACATCG AGATCATGGC GCAGCTGCCG
CGCGAGGACT CCGGCAAGAT CTTCAAGCGC CGGCTACGCG ATCCGTATTG GGCCAAAGCT
GGTCGGGTGA TTTAG
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| Protein sequence | MSQGELTQSH ITQGHLSHGI VSGDRHRSFE EVNARAAQIA GGLQGLGVKP GDCVCVLMRN
DIAFLESAYA VMMLGAYMVP VNWHFKPEEV LYVLGDSGTR VLIGHADLLH HAAGIVPAAV
TMLSVPTPPE ILASYSIDPD HRSAPAGAID LDGWLAQQRP YDGPALPQPQ NMIYTSGTTG
HPKGVKRFAP TPQQSANAEA MRAAIYGLKP GVRALCPGPL YHSAPNSFGI RAGRLGGVLA
LMPRFEPEAL LQLIEQHRID TVFMVPTMFI RLMKLPEAVR NKYDVSSLRH VIHAAAPCPP
DVKRAMIDWW GPVIYEFYGS TESGAVTFAS SEDALKKPGT VGKIAAGAEL VFVDDDNNEV
PQSEVGEIFS RIPGNPDFTY HNKPEKRAEI DRGGFITSGD MGYLDEDGYV FICDRKRDMV
ISGGVNIYPA EIEAALHAIP GVHDCAVFGI PDAEFGEALM AMLEPQPGVT LEQSNIREQL
RLSLAGYKVP KHIEIMAQLP REDSGKIFKR RLRDPYWAKA GRVI
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