| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1863 |
|---|
| Symbol | |
|---|
| ID | 4022345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2084695 |
|---|
| End bp | 2085684 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637962056 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_568999 |
|---|
| Protein GI | 91976340 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0353182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.189268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAG CCTTCGAGGA TGCGCTCGCG CGCAGCGTTC AAAATTGGTG CGCGGGCGCG
ACAGGCATTC GCGCCGCCGC GCAGCTCTCC GGCGGCGCAA GCCAGGAAAC CTGGGCGTTC
ACGATCGAGC GGCCGGACGG CGATGTCGAC GCCATCCTGC GTCGCGCGCC GCCGGGTTAT
GGCGCCGCGC CTTCGCGCGC GGCCGGGCTC GACGCCGAAG CTGAATTGAT GCGGCTGTCA
TATGACGCCG GCGTTCCGTC GCCGCGGGTG CTGCATGTGT TGACGGAAGC CGATCAGTGC
GGCACCGGCT TTATCATGCA GCGGGTCGAG GGTGAAACCA TCCCGCGCAA GATCCTGCGC
GATGCGCAGT TCGCAACCGC GCGGCCGATG CTGGCGCGTC AGCTCGGCGG GATCCTGGCG
GGCATTCACG GCATCGAATC CGCCGCTCTG CCGGCGCTGC GCACGATGAG TTCGACCGAG
GAAATTGCAC AGCTCGATGC GGAATATCGC AGCTTCGGCT GGCCGCGACC GGTGTTCGAA
CTGGCGCTGC GCTGGCTCAG CCGTCACGAT CCCGGTGTGT CGAAGAAGAT CACATTGGTG
CACGGCGATT TCCGCCACGG CAATCTGATT ATCGGGCCCG ATGGCGTGCG CGCCGTGCTC
GATTGGGAGC TCGCTCATCT CGGCGATCCG ATGGAAGATC TCGGTTGGGT CTGCGTCAAT
TCGTGGCGGT TCGGCGAGAT CGACAAGCCG GTCGGCGGAT TGGGTTCGCG CGAGGAGATG
TTCGCGGGCT ATGAAGCCGG CGGTGGAAAT GTCGACGCCG ATCGCGTGAA GTTCTGGGAA
GTGATGGGAA CGCTGCGCTG GGGCATTATG TGCTGCGGCA TGATGCAACG CTTTCGCCAG
GGGCCCGATC ACTCGATGGA GCGTGCGATG ATCGGGCGGC GCTCGTCGGA AACAGAGATC
GATCTGTTGC GGATACTCGC GCCGCTTTGA
|
|---|
| Protein sequence | MSAAFEDALA RSVQNWCAGA TGIRAAAQLS GGASQETWAF TIERPDGDVD AILRRAPPGY
GAAPSRAAGL DAEAELMRLS YDAGVPSPRV LHVLTEADQC GTGFIMQRVE GETIPRKILR
DAQFATARPM LARQLGGILA GIHGIESAAL PALRTMSSTE EIAQLDAEYR SFGWPRPVFE
LALRWLSRHD PGVSKKITLV HGDFRHGNLI IGPDGVRAVL DWELAHLGDP MEDLGWVCVN
SWRFGEIDKP VGGLGSREEM FAGYEAGGGN VDADRVKFWE VMGTLRWGIM CCGMMQRFRQ
GPDHSMERAM IGRRSSETEI DLLRILAPL
|
|---|
| |