| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1840 |
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| Symbol | |
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| ID | 4022322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2059175 |
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| End bp | 2060551 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962034 |
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| Product | Beta-glucosidase |
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| Protein accession | YP_568977 |
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| Protein GI | 91976318 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.185877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGC TCACACCGCC GACCCAGATG CCGATGCCGG GTCATCCATC ACTTTTGCAC
GTCAAGCCCG ATTTCATCTG GGGCGTGTCC AGTTCGAGCT TTCAGATCGA GGGCGCCACC
AACGAAGACG GCCGCGGCGC GAGCATCTGG GACACCTATT GCCGCACCGG ACAAGTCGCC
AACAACGACA CCGGCGACGT CGCCTGCGAC CATTATCATC GCTACAAGGA AGACGTCGCG
CTGATGAAGG CGCTCGGCGT GCAGGCCTAT CGTTTCTCCA TTGCGTGGCC GCGCGTGCTG
CCGCTAGGCG ACGGCGCGGT GAACGAAGCC GGCCTCGCCT TCTACGACCG GCTGATCGAC
GAACTTCAGG CCGCCGGGAT CGAGCCGTGG ATCTGCCTGT ATCACTGGGA CCTGCCGCAA
GCGCTGGAAG ACCGCGGCGG CTGGCTCAAC CGCGACATCG TCGGCTGGTT CGCCGACTAT
GCAAGGCTGA TCGGCGAGCG TTACGGCAAG CGGGTGAAGC GGTTCGCAAC CTTCAACGAA
CCGGGGATCT TCAGCCTGTT CAGCCGCTCC TTCGGGGCGC GCGACCGCAG CGCCGACGAC
AAGCTCCACC GCTGGATCCA TCACGTCAAT CTCGCCCATG GCGCCGCGGT CGATGCGCTG
CGCGAGACGG TGCCGGACGC ACAGATCGGC CTGGTTACAA ATTATCAACC AATCTTCCCA
TCGAGCGACA AGCCCGAGGA CATCGCCGAA GCCGCGCTGA TCGGCGACTA CTGGAATTGT
GCCTTCTCCG ATCCGCAATA TCTCGGCGAG TATCCGGCCC TGATCCGCGA CGCGCTCGCG
GCGCACGTCA GGCCGGGCGA CATGGAGCAG ATTCACCGGC CGCTCGACTG GTTCGGGCTG
AACCACTACA GCCCGGTCTA CATCAACTCC GATCCGAATG CGATCATCGG GCTCGGCTGG
GGCGCGAAGC CCGACAGCAT TCCGCGGACG CCCATCGACT GGACGATCGA ACCGGACGCC
TTCCGCGACA CGCTGATCGA GGTCAGCCGA CGCTACGGCA AGCCGGTCTA CGTCACCGAG
AACGGTTATG GCAGCAACAT CGAAAAGCCG GACGACACCG GCGCGGTGAT CGATCGCGGC
CGCGTCGCCT TCCTGCACGA CTACATCTCC GGCCTCGACG CGGCGATTGC CGCCGGCGCC
GACGTGCGCG GCTATTTCGT CTGGTCGCTG CTCGACAATT TCGAATGGGA GTCGGGCTAC
GGCGTGCGTT TCGGCCTGAC CTATATCGAC TACGCGACGC AGCGGCGGAT TCCGAAGGCG
TCGTTCAATT GGTACGCGGA CGTCATTCGT CAGGCCCGCG GCGGCGCGAC CGCGTAA
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| Protein sequence | MDTLTPPTQM PMPGHPSLLH VKPDFIWGVS SSSFQIEGAT NEDGRGASIW DTYCRTGQVA
NNDTGDVACD HYHRYKEDVA LMKALGVQAY RFSIAWPRVL PLGDGAVNEA GLAFYDRLID
ELQAAGIEPW ICLYHWDLPQ ALEDRGGWLN RDIVGWFADY ARLIGERYGK RVKRFATFNE
PGIFSLFSRS FGARDRSADD KLHRWIHHVN LAHGAAVDAL RETVPDAQIG LVTNYQPIFP
SSDKPEDIAE AALIGDYWNC AFSDPQYLGE YPALIRDALA AHVRPGDMEQ IHRPLDWFGL
NHYSPVYINS DPNAIIGLGW GAKPDSIPRT PIDWTIEPDA FRDTLIEVSR RYGKPVYVTE
NGYGSNIEKP DDTGAVIDRG RVAFLHDYIS GLDAAIAAGA DVRGYFVWSL LDNFEWESGY
GVRFGLTYID YATQRRIPKA SFNWYADVIR QARGGATA
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