Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1802 |
Symbol | |
ID | 4022284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2015783 |
End bp | 2017000 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961996 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_568939 |
Protein GI | 91976280 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.244015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGACA CGGTCTTGAT TGCTGGAGCC GGACACGCCG GATTTCAGGT CGCCGTCTCG CTGCGCCAGG CCAAGTACAC CGGTCGCATC GCGCTGATCA ACGACGAGAA GCATCTGCCG TATCAACGGC CGCCGCTGTC GAAGGCCTAT CTCAAGAGCG GTGGCGATCC GAACTCGCTG ATGTTCCGGC CGGAGAAGTT CTTCCAGGAC CAGACCATCG AGCTGATCTC GGATCGTGCA GTGTCGATCG ATCGCGCCGC CCGCAAGCTG CTGCTCGCCT CCGGCGAAGC GATCGACTAC GGCCATCTGG TGCTCGCCAC CGGCGCACGC AACCGCCAGC TCGACGTGCC GAACGCGACG CTCGACGACG TGTTGTATCT GCGCACGCTC GACGAGAGCG AAATGGTGCG CCAGCGGATG CCGGAAAAGA AGCACGTCGT GGTGATCGGA GCCGGCTTCA TCGGTCTGGA ATTCGCCGCC ACCGCCCGCG GCAAGGGCAT GGAGGTCGAC GTCGTAGAGC TCGCCCCGCG GGTGATGGCG CGCGCGGTCA CGCCGGAAAT CTCGAGCTAC TTCCACGACC GCCACACCGC GGCGGGCATC CGCATCCATT ACGGCGTGCG CGCTACCGAG ATCGAAGGCA AGGACGGCCA CGTCAGCGGC GTGGCGCTCA GCGACGGCCG CACGCTGCCG TGCGATCTGG TCGTGGTCGG CGTCGGCGTG ATCCCGAATG TCGAGCTGGC GTCGGCGGCC GGGCTGCCGA CCGCGTCGGG CATCATCGTC GACGAGCAGC TCCTCACCGA GGATCCGAAC ATCTCGGCGA TCGGCGATTG CGCGCTGTTC AACAGCGTGC GGTTCGGCGA GGTGATGCGG CTGGAGTCGG TACAGAACGC CACCGATCAG GCACGCTGCG TCGCGTCGCG GCTCACCGGC GAGCCCAAGA CCTATGACGG CTATCCGTGG TTCTGGTCCG ATCAGGGCGA CGACAAGCTG CAGATCGCGG GCCTCACCGC CGGCTTCGAC AGCGTCGCGG TGCGCGGCAG CGTCGCCGAG CGCTCGTTCT CGGCGTTCTG CTACAAGGAC GGCAAGTTGA TCGGCGTCGA GTCGGTCAAT CGCGCCGCCG ACCACGTGTT CGGCCGCAAG ATCCTGCCGC TCGACAAGTC GATCACGCCG GAGCAAGCCG CCGATCTCAC CTTCGACCTG AAGAAGGCGA TCGCGTAG
|
Protein sequence | MNDTVLIAGA GHAGFQVAVS LRQAKYTGRI ALINDEKHLP YQRPPLSKAY LKSGGDPNSL MFRPEKFFQD QTIELISDRA VSIDRAARKL LLASGEAIDY GHLVLATGAR NRQLDVPNAT LDDVLYLRTL DESEMVRQRM PEKKHVVVIG AGFIGLEFAA TARGKGMEVD VVELAPRVMA RAVTPEISSY FHDRHTAAGI RIHYGVRATE IEGKDGHVSG VALSDGRTLP CDLVVVGVGV IPNVELASAA GLPTASGIIV DEQLLTEDPN ISAIGDCALF NSVRFGEVMR LESVQNATDQ ARCVASRLTG EPKTYDGYPW FWSDQGDDKL QIAGLTAGFD SVAVRGSVAE RSFSAFCYKD GKLIGVESVN RAADHVFGRK ILPLDKSITP EQAADLTFDL KKAIA
|
| |