Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1800 |
Symbol | |
ID | 4022282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2013010 |
End bp | 2014143 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961994 |
Product | dolichyl-phosphate beta-D-mannosyltransferase |
Protein accession | YP_568937 |
Protein GI | 91976278 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0148335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCAAG CCAGCCCAGC GGTCGCCGGA ACGCGCGTGC AGCCATCGGC TGCGCTGCAG TTGTCCGTTG TCGTTCCGAC TTTCAACGAA CGCGACAATG TCGAGGTGCT GTTCCGCAAG CTGGAAGCGG CGCTCGCGGG CGTGGCGTGG GAAGTCATCT ATGTCGATGA CAATTCTCCC GACGGCACCT GGCAGGTGGT GCGCGAACTG GCCTTGCGCG ATCCGCGGGT GCGCTGCATC CGGCGGATCG GGCGGCGCGG CCTCTCGGGC GCCTGCATCG AGGGCATCCT CGCCGCCAGC GCGCCGTTCG CGGCGGTGAT GGACGCCGAC CTGCAGCACG ACGAAACCCA GCTCGCGAAA ATGCTCGACC TGCTGGAGCG TGGCGCCGCC GATCTCGTGG TCGGCAGCCG CTATATCGCC GGCGGCAGCG CCGACAGCTT CGACCGGCAG CGCGCGGGTT TCAGCGCCTT GGCCACCGCG GTGGCGCGCA AGGTGCTGAA GGTCGAGATC GCCGATCCGA TGAGCGGCTT CTTCATGATC CGCCGCGATC GCTTCGAACA GCTCGCGCCG CAGCTTTCGA CCCAGGGCTT CAAAATCCTG CTCGACATCG TCGCCACCGG GCAGGGCAGC CTGCGGACCG TGGAAGTGCC TTTCACGTTC GGCTCGCGGC TGCACGGCGA GAGCAAGCTC GACTCGATGG TGGCGCTGGA TTTCCTCGGT CTGGTGCTGG CGAAATACAG CAACGACATC CTGTCGCTGC GTTTCATCCT GTTCGCGCTG GTCGGCTCGA CCGGCGTCGT CGTCCATTTC CTGACGCTGT ATCTGGTGCT GAAGGTGTTC GAGCAGCCGT TCGCCGAGGC GCAGGGGGCG GCGGCGGTGG TGGCGATGAC CAGCAACTTC ATCCTCAACA ATTTTCTGAC CTATCGCGAT CAACGACTGA AGGGTTTTGC GATCCTGCGC GGGCTGCTGT TGTTCTACCT GGTGTGCGGC GTCGGTCTGA TCGCCAATGT CGGCGTCGCC TTCGCGGTGT ACAACGAGCA CATCACCTGG TGGCTGGCGG GCGCCGCCGG CGCGGTGATG GGCGTGGTCT GGAACTACGC GATGTCGGGC CTGTTCGTCT GGCGCAAGCG TTGA
|
Protein sequence | MTQASPAVAG TRVQPSAALQ LSVVVPTFNE RDNVEVLFRK LEAALAGVAW EVIYVDDNSP DGTWQVVREL ALRDPRVRCI RRIGRRGLSG ACIEGILAAS APFAAVMDAD LQHDETQLAK MLDLLERGAA DLVVGSRYIA GGSADSFDRQ RAGFSALATA VARKVLKVEI ADPMSGFFMI RRDRFEQLAP QLSTQGFKIL LDIVATGQGS LRTVEVPFTF GSRLHGESKL DSMVALDFLG LVLAKYSNDI LSLRFILFAL VGSTGVVVHF LTLYLVLKVF EQPFAEAQGA AAVVAMTSNF ILNNFLTYRD QRLKGFAILR GLLLFYLVCG VGLIANVGVA FAVYNEHITW WLAGAAGAVM GVVWNYAMSG LFVWRKR
|
| |