Gene RPD_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1787 
Symbol 
ID4022269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2001493 
End bp2002194 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID637961981 
Productxanthine dehydrogenase accessory factor 
Protein accessionYP_568924 
Protein GI91976265 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.112917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.243533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTCG AGACCTTGCA GCAGTTGAAC ACGGAGCGCG CCGCGCGGCG GGCCGCGATC 
GTCGTCACCG ACACCGCGAC GGGCGAGCAG CGGCTGGTGA AGGTGGCCGA GATCGCCGCA
GATCCGCTCG CGGCGGAATT GTCGAAGCAA CTCCGGATGG GCAAGAGCGC GACCATCGAC
GCCGACGGCA GGAAGCTGTT TCTCAATGTC TACGCGCCGA CCGCGAAGCT CGTGATCGTC
GGCGCGGTGC ATATCAGCCA GGCGCTCGCG CCGCTCGCCC GCTCGCTCGG CTACGACGTC
ACCGTGGTCG ATCCGCGCAC CGCGTTTGCG AGCCCCGAGC GGTTTCCCGA CGTGCCGCTG
ATCGCGGAGT GGCCGGACGT CGCATTGCCG CCGCTGAACA TCGATCACTA CACCGCCTTC
GTCGCGCTGA CCCACGACCC GAAGATCGAC GATCCGGCGC TGCTGCACGC CTTCGCGCGC
GACTGCTTCT ATATCGGCGC GCTCGGCTCG AAGAAGACCC ATGCGCGGCG CGTCGACCGC
CTGAAGGAGC AGGGCGCGTC CGAGGCCGAC GTCGCCCGGA TTCATGCGCC GATAGGTCTG
TCGATCGGCG CGGTGTCGCC GTCGGAGATC GCGGTGTCGA TCATGGCCGA GATCACCGCG
ACGCTGCGGA TGCCCAACGC GGCCAAGGCG ACGGCAGCAT GA
 
Protein sequence
MKLETLQQLN TERAARRAAI VVTDTATGEQ RLVKVAEIAA DPLAAELSKQ LRMGKSATID 
ADGRKLFLNV YAPTAKLVIV GAVHISQALA PLARSLGYDV TVVDPRTAFA SPERFPDVPL
IAEWPDVALP PLNIDHYTAF VALTHDPKID DPALLHAFAR DCFYIGALGS KKTHARRVDR
LKEQGASEAD VARIHAPIGL SIGAVSPSEI AVSIMAEITA TLRMPNAAKA TAA