Gene RPD_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1774 
Symbol 
ID4022256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1989476 
End bp1990210 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID637961968 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_568911 
Protein GI91976252 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.245304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.604488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCACG ACGTCTCGAT CCTCGCGGCG CTGATCGCCG GTCTGGTCAG CTTCCTGTCG 
CCCTGCGTGC TGCCGCTGGT GCCGCCGTAC CTGATCTATC TGACCGGCGC GACCATCGAG
CATGTCGCCG CTGACGAGTC CGAGCGCAGC TCGAAACGCG CGGTGATGAT CTCTGCGGTG
ATGTTCGTGC TCGGCTTTTC GACGGTATTC GTGGCGCTCG GAGCCAGCGC CAGCCTGGTC
GGCGGCCTGA TCCGCGCCTG GTCGGCGGAG CTTGCGATCG TCGCCGGCAT CGTCATCATC
CTGATGGGGC TGCACTTCCT GGGGCTGACG AAGATCGGCA TCCTGATGCG CGAGGGACGG
CTGCCGATCC CGAAGCCGGT CGGGCTGTGG GGCGCCTATG TGATGGGGCT GGCCTTCGCC
TTCGGCTGGA CGCCGTGCAT CGGCCCGATC CTCGCCGCGA TCCTGTCGGT CGCCGCCGCC
GAAGCCACGG TGGCGAAGGG CGCGGGACTG CTCGCGATCT ACTCGCTCGG CCTCGGCGTG
CCGTTCCTGC TCGCGGCGTT GATGATCGAG CAGTTCTCCG GCCTGTTCGC GCGGATGAAG
AAACACCTCG CGACGGTCGA GCGGGTGATG GGCGCGCTGA TGGTGCTGAC CGGCATCGGC
TTCCTCACCG GCGCCATCAC CGACGTCAGC GTCTGGCTGC TGAACACTTT CCCGGCGTTG
GGAAATATCG GGTAG
 
Protein sequence
MIHDVSILAA LIAGLVSFLS PCVLPLVPPY LIYLTGATIE HVAADESERS SKRAVMISAV 
MFVLGFSTVF VALGASASLV GGLIRAWSAE LAIVAGIVII LMGLHFLGLT KIGILMREGR
LPIPKPVGLW GAYVMGLAFA FGWTPCIGPI LAAILSVAAA EATVAKGAGL LAIYSLGLGV
PFLLAALMIE QFSGLFARMK KHLATVERVM GALMVLTGIG FLTGAITDVS VWLLNTFPAL
GNIG