| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1745 |
|---|
| Symbol | |
|---|
| ID | 4022227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1962067 |
|---|
| End bp | 1962897 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637961939 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_568882 |
|---|
| Protein GI | 91976223 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC CCACTGCCGC CAAGCGCGCT GCGTTTCGCA AATTGCACGA GAGCGGTTGT
TTCGTGCTGC CCAACCCCTG GGATGTCGGC AGCGCGCGGC TATTGCAGCA TCTCGGGTTT
CAGGCGCTGG CGTCGACCAG CTCCGGCTAT GCGTGGTCGA CCGGGCGGGC CGACAATCAG
GTCGCCTGCG ACGACGTGCT CGCGCATCTG ACGATGCTCA GCGCGGCGGT CGACCTGCCG
ATCAATGCCG ATTTCGAAGC CGGCTTCGCC GACGATCCGC AGGGCGTCGC CGCCAATGTC
ACCCGCGCGG TCGCGACCGG GATTGCCGGG CTGTCGATCG AGAATTCGAC CGGCGATGCG
CAGCGGCCGC TGTATGACGA CGCGCTCGGC GTCGAGCGAA TCAAAGCGGC GCGGGCCGCG
ATCGATGCGA CCGGCGAGGA TGTGATGCTG GTCGCGCGCT GCGAGGGCTT TCTGTGGGGC
GAGCGCGATC TGGCGAAGAC CGCGGCGCGG CTTGCAGCCT TTGCCGAGGC CGGCGCCGAC
TGCCTGTATG CGCCGGGCGT GGCCACCGAG GCCGAAATCA CCCCGCTCGT GAAGGCGGTG
GCGCCGAAGC CGCTCAACGT GCTGGTCGTG CAGCCGGGCA TGACGGTCGC GGCTCTCGCC
GATCTCGGCG TGCGGAGGAT CAGCGTCGGC GGCGCGCTGG CGCGCTCGGC CTGGGCGGGG
TTCCTCGAGG CCGCGCGCGA AATCGCGCAG GGAGGCACCT TCACCGCGTT TGCGAAGGCG
GCGAAGGGCG GGGAACTCAA CAAGCTGTTC GGCGCGGGGC CTGGGGCCTG A
|
|---|
| Protein sequence | MPIPTAAKRA AFRKLHESGC FVLPNPWDVG SARLLQHLGF QALASTSSGY AWSTGRADNQ
VACDDVLAHL TMLSAAVDLP INADFEAGFA DDPQGVAANV TRAVATGIAG LSIENSTGDA
QRPLYDDALG VERIKAARAA IDATGEDVML VARCEGFLWG ERDLAKTAAR LAAFAEAGAD
CLYAPGVATE AEITPLVKAV APKPLNVLVV QPGMTVAALA DLGVRRISVG GALARSAWAG
FLEAAREIAQ GGTFTAFAKA AKGGELNKLF GAGPGA
|
|---|
| |