Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1739 |
Symbol | |
ID | 4022221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1956658 |
End bp | 1958337 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637961933 |
Product | chemotaxis sensory transducer |
Protein accession | YP_568876 |
Protein GI | 91976217 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCGA AATTGTCTCG GGTCATTCTG ATTTTCGGCC TGGTAGTTTT CGCAGGTCTG GTTGCGGTGA TTGCGTCGAG CGTCTATGGC CTTTCGCAAT TGAAGATCGG CGGCCCGCTC TACGCCCAGC TCAAGCTGCA GAACGACCTG GTCGCGGATA TTCTTCCTCC CCCGGAATAT GTCATCGAAG CCCATCTCGA GGCGCTGATG GCGTTGCGGG AGCCGTCCGA GTTGTTCACG CATCGCGACC GCATCGTCAA GCTGAAGGCG GACTACAACG AACGCCACGA GTTCTGGCAA AAGTCGGCGC TGGAAGAGCC ACTCAAGAAA GAGTTGGTGG TGGATTCCGA CCGCGAAGTG AGCAAGTTCT GGAATGTGCT GGAACGCCAG CTCCTGCCCG CCATCGAACA AGGCGACGAG GCGGCGAAAT CAGCGGCCTA CAAGCAGTTG TTTCAAGCCT ATGCGGCGCA TCGCGAGATC ATCGATGATA TCGTCAAGCG CGCCACCGAT CTGAATACCT CGGTCGAAGC CTCGACCGCT GAGCGCGCGA CGATCCTGAC CTGGCTGGTG TGGGGCATTT CCGGCGTTGT CCTGCTGGTG TTCTTCGCGG GTCTTGCCGG CGTCATCCGT GGCGTCATCC GCCCGATCGT CGGGATGACC GACGTGATGT CGCGGCTCGC GCACGGCGAC CGCAATATCG AGGTTCCTGG CGTCGATCGA CGCGACGAGG TCGGTGCGAT GGCGCGGGCG CTGCAGGTGT TCCGCGACAA CGCTCTCAAT GTCGATTCCC TCGAGACCGA GCGGGATCAG AAGGTGCTGG CCGAAACCGA GCGCAAGGCG GCGATGCAGC AGATTGCCAA CGAGTTCGAT ACCGCGATCG GCCGGATCGT CGACGCCGTG ACCACGGCGT CGTCCGAGCT GGAGCATGCG GCTGGCCGCC TCAACGGCGC GGCCGAGACC ACCGACCATT TGGCGCAGTC GGCGACGACG GTGTCACAGG AATCGTCCTC AAACGCCCAG AGCGCCGCGT CGGCCTGCAA ACAGATCGCG ACATCCGTGC TCGAGATCGC CCAGCAAGCT CAGCAATCCC AGGAGATCTC CCAGGCGGCT GTCCGGCAGG CGGAGGAGAC CAATGGGCGG ATTGCGGAAC TGTCGCATGC GGCGGATCGG ATCGGTGAGG TGATCAAACT GATCAATGCC GTGGCGGCGC AGACCAATCT GTTGGCGCTC AACGCGACCA TCGAAGCGGC ACGCGCCGGC GAGGCCGGCC GCGGCTTTGC GGTGGTGGCT TCCGAAGTGA AGGCGCTGGC GGCGCAGACC GCAAAGGCGA CCGAAGAGAT CAGCGAACAG ATCGCCCAGA TGCAGACTGC GACCGCGCAG TCGGTGGCGG CGATCCAGAC CATCGGCGGC ACGATTACCG AGATCTGTGG CATCTCGGAG TCGATCGCAG CCGCTGTCGA ACAGCAGGGA GAAGCCACCG CGGGGATCGC CCGCAGCGTC CAGCATGCGG CCGACGGTGC GATGCAGGTC TCGACCAGCA TGGAGAAGAT CGGTCATGGC GCCGCAGAGA CCGACCAAGC GTCCGTTCAT GTTCACAAGC TGTCGAGTTC GCTGCTGTCG GAAAGCAAGC ACCTCAAGAT TGAAGTGGAG AAGTTCTCGG AGATGGTCCG CGCCGCCTGA
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Protein sequence | MRPKLSRVIL IFGLVVFAGL VAVIASSVYG LSQLKIGGPL YAQLKLQNDL VADILPPPEY VIEAHLEALM ALREPSELFT HRDRIVKLKA DYNERHEFWQ KSALEEPLKK ELVVDSDREV SKFWNVLERQ LLPAIEQGDE AAKSAAYKQL FQAYAAHREI IDDIVKRATD LNTSVEASTA ERATILTWLV WGISGVVLLV FFAGLAGVIR GVIRPIVGMT DVMSRLAHGD RNIEVPGVDR RDEVGAMARA LQVFRDNALN VDSLETERDQ KVLAETERKA AMQQIANEFD TAIGRIVDAV TTASSELEHA AGRLNGAAET TDHLAQSATT VSQESSSNAQ SAASACKQIA TSVLEIAQQA QQSQEISQAA VRQAEETNGR IAELSHAADR IGEVIKLINA VAAQTNLLAL NATIEAARAG EAGRGFAVVA SEVKALAAQT AKATEEISEQ IAQMQTATAQ SVAAIQTIGG TITEICGISE SIAAAVEQQG EATAGIARSV QHAADGAMQV STSMEKIGHG AAETDQASVH VHKLSSSLLS ESKHLKIEVE KFSEMVRAA
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