Gene RPD_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1716 
Symbol 
ID4022196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1929590 
End bp1930411 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID637961910 
Producttranscriptional regulator 
Protein accessionYP_568853 
Protein GI91976194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA TCATCTCTTC GGCCAAAGCG TCCGCCGTTG CGCAGCCGGT CCGCGTCGGC 
GATTACTTGC GGCAATGGCG GCAGCGCCGC CATCTCAGCC AGCTCGATCT CGCGGTCGAC
GCGGAGATTT CCGCGCGGCA TCTGTCGTTT GTCGAAACCG GCCGCGCCGC GCCGTCGCGC
GACATGGTGA TGCGTCTGGC GGAACGTCTC GACGTGCCGC TGCGCGAGCG TAACGTGCTG
CTGGTGGCGG CGGGTTTCGC GCCGGCGTTT CCGCAACGGA CGCTCGATGA TCCGGCGCTC
ACGGCCGCGC GCGCCGCGGT CGATCAGGTT TTGAAGGCGC ATGAACCCAG CCCGGCGCTC
GCGGTCGACC TGCATTGGAA CCTGGTATCG GCCAATCGCA TGGTGATGCC GATTCTGGAC
GGCATCGCGC CGCATCTGCT GGCGCCGCCG CTCAACGTGT TGCGGCTGTC GTTCCATCCC
GACGGGCTCG GGGCGCGCAC CGCCAATCTC GGCGAATGGT GCGCGCATCT GCTGGAGCGG
CTGCACCGGC AATGCGAAGC CACCGCCGAT CCGCAACTGC TCGCGTTGTA TCAGGAACTG
AAGACCTATC CGGTGCCGGC CCGCGCCGCG CCGATTTCGG CGGATGCGGT GGCGGTGCCG
TTCAAATTGA AGCGCGGCGG CGAGGTGCTG AGTTTCATTT CGACCACCAT GGTGTTCGGC
ACGCCGATCG ACGTCACGCT GTCGGAGATC GCGATCGAGA CGTTCTTTGC GGCCGACGAC
GCCACCGCGG CGCGGCTGCG CAGCATGGCC GCGAGCCTCT GA
 
Protein sequence
MTTIISSAKA SAVAQPVRVG DYLRQWRQRR HLSQLDLAVD AEISARHLSF VETGRAAPSR 
DMVMRLAERL DVPLRERNVL LVAAGFAPAF PQRTLDDPAL TAARAAVDQV LKAHEPSPAL
AVDLHWNLVS ANRMVMPILD GIAPHLLAPP LNVLRLSFHP DGLGARTANL GEWCAHLLER
LHRQCEATAD PQLLALYQEL KTYPVPARAA PISADAVAVP FKLKRGGEVL SFISTTMVFG
TPIDVTLSEI AIETFFAADD ATAARLRSMA ASL