| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1663 |
|---|
| Symbol | |
|---|
| ID | 4022143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1873139 |
|---|
| End bp | 1873636 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637961858 |
|---|
| Product | methionine sulfoxide reductase B |
|---|
| Protein accession | YP_568801 |
|---|
| Protein GI | 91976142 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.623127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.248193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC GCCGTATCCT GCTCGCTTCT GCCGCTCTGG CCGCCTTGTT CGGTTTCCGC
TGGCTGCGGC CGGACGCCGC CCGCGCCGCG GAGAAATTCG AGATCGAGAA GACGCCGGAG
GAATGGCGGG CGCAGCTGAC GCCGATGCAG TACAAAATCC TGCGCGAGGA GGGCACCGAG
CGGCCGTTCT CGAGCCCGCT GCTGAAGGAA CACCGCAAGG GCACCTTCTC CTGCGCCGGC
TGTGACCTGC CGCTGTTTGC GTCCGACACG AAATACGACA GCGGCACCGG CTGGCCGAGC
TTCTGGCAGC CGCTGCCGAA CGCGGTCGGC GAGCGCAAGG ATTCCACGCT CGGCATGGTC
CGCACCGAAG TGCACTGCCG CCGCTGCGGC GGCCATCTCG GCCACGTGTT CGACGACGGC
CCGAAGCCGA CCGGCCTGCG CTACTGCATG GACGGCTTCG CGCTGACCTT CAAGCCGGCG
ACGTCGGGCG CAACCTGA
|
|---|
| Protein sequence | MIDRRILLAS AALAALFGFR WLRPDAARAA EKFEIEKTPE EWRAQLTPMQ YKILREEGTE
RPFSSPLLKE HRKGTFSCAG CDLPLFASDT KYDSGTGWPS FWQPLPNAVG ERKDSTLGMV
RTEVHCRRCG GHLGHVFDDG PKPTGLRYCM DGFALTFKPA TSGAT
|
|---|
| |