Gene RPD_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1656 
Symbol 
ID4022136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1866753 
End bp1867814 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content65% 
IMG OID637961851 
Producthypothetical protein 
Protein accessionYP_568794 
Protein GI91976135 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0333336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.970819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGAT TGCTGAGCGC GCTGGGGCGT GGCTTCAAGA CCTATGTCGG CTGGAAACGG 
CTCGGCATCG TCGCGAGCGT CCTGATCATC GGCTTTGCGA TCACGTCGCT GTTCCGCACT
CTCAAGGGAG TCGATAGCGC CGTCATCCTC ACCGCGCTGA CCGAGAAGAG CCCGGGTCAG
ATCGGGATGG CCGCGCTGTG CGTGGTCGGG GCGTTCTGCA CGCTGACCTT CTACGATTTC
TTTGCGCTGC GCACGATCGG CAAGCTGCAC GTGCCGTACC GGATCGCGGC GCTGTCGAGC
TTCACCTCCT ATGTCATCGG CCACAATCTC GGCGCCACGG TGTTCACGGG CGGCGCGATC
CGGTTTCGGA TCTATTCCGA CTACGGCCTC TCCGCCATCG ACGTCGCCAA GATCTGCTTC
ATCTCCGGCC TGACCTTCTG GCTCGGCAAT CTGTTCGTGC TCGGCATCGG CATGATCTGG
CATCCGGCCG CGGCGAGCGC GATGGATTTG CTGCCCGACA GCATCAACCA GCTGATCGGC
GTCGCCTGCC TGACCGGCAT CGCGGCCTAT TTCCTGTGGC TGGCGACCGG CAAGAAGCGC
CGCGAGCTCG GTCAGAACGG CTGGAAGGTG GTGCTGCCGT CGGCGCGGCT GACGCTGCTG
CAGGTGCTGA TCGGCGTGGT CGATCTCGGC TTCTGCGCGC TGGCGATGTA CATGCTGATG
CCGGCCGAGC CCTATATCGA TTTCGTGTCG CTGGCGGTGG TGTTCATCCT CGCCACCCTG
CTCGGCTTCG CCAGCCATGC ACCCGGCAGC CTCGGTGTGT TCGATGCGGC GATGCTGGTG
GCGCTGCCGA TGTTCCCCCG CGAGGACATC ATCGCGACGC TGCTGATCTA CCGTGTGCTG
TATTTCCTGC TGCCGTTCGG GATCGCGATC TCGATCCTGG GGGTACGCGA GCTGTGGCTG
AGCGTGGTCA AGCCGTGGCA CGAGAAGCGC GCCGGCAACG GCCACCCGGT AACGGCCGCC
ACTCCGGTCC GGCAGATCGG GCGGACGTCC TCGAAACTTT GA
 
Protein sequence
MHRLLSALGR GFKTYVGWKR LGIVASVLII GFAITSLFRT LKGVDSAVIL TALTEKSPGQ 
IGMAALCVVG AFCTLTFYDF FALRTIGKLH VPYRIAALSS FTSYVIGHNL GATVFTGGAI
RFRIYSDYGL SAIDVAKICF ISGLTFWLGN LFVLGIGMIW HPAAASAMDL LPDSINQLIG
VACLTGIAAY FLWLATGKKR RELGQNGWKV VLPSARLTLL QVLIGVVDLG FCALAMYMLM
PAEPYIDFVS LAVVFILATL LGFASHAPGS LGVFDAAMLV ALPMFPREDI IATLLIYRVL
YFLLPFGIAI SILGVRELWL SVVKPWHEKR AGNGHPVTAA TPVRQIGRTS SKL