Gene RPD_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1638 
Symbol 
ID4022118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1836634 
End bp1837587 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content67% 
IMG OID637961833 
Producthypothetical protein 
Protein accessionYP_568776 
Protein GI91976117 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCGT CGTGCGGCGC CGGGCGTCGT TGGAGTAGAT TGATGGAAAC GCGGGCGAAT 
TACTTCCTGA TCGGCACTTT CACCCTGGCG GTGATCGCCG CGGCGTTCGG CTTCGTGCTG
TGGTTCCAAA GTCTTCATTC CACCAAGGCG CGCAGCCCCC TGCGGGTGGT GTTCGAAGGC
GCGGCCTCGG GGCTGCGCAA CGGCGGCAGC GTCAATTTCA ACGGCGTTCG GGTCGGCGAG
GTGATTTCGG TCAAGCTCGA CAATCCGAAG CGCGTGGTGG CGCTGGCGAT GGTCGAGAAC
ACCGCGCCGA TCCGCAAGGA CACGCTGGTC GGGCTCGAGT TCCAGGGCCT GACCGGGGTC
GCGGCGATTT CGCTGAAGGG CGGACTGGAT TCCGCCCCGC CGGTGCCGCT CGACGAGGAC
GGCGTGCCGG TGCTGACCGC CGACCCCGAG CTGCTGATGG ATATCTCGGA ATCGGTGAAG
GCGACGCTGC GCAACCTCAA CAAGGTCGTG GCCGAAAATG CCGAAACAGT GAAGGAGTCG
CTGTCCAACC TGCAGACCTT CACCGCCAGT CTGGCGCGCA GCTCGGACAA GATCGACAGC
ATCATGGTCA AGGTCGACGG TGTGATCGGC AAGACCGACA GCGTGATGCA GGGGATCGAC
GCCTTGGCCG GCGGCAAGGA CGGCGGCGAG CTGTTCCAGG CGGTCAAGTC GTTCCGGGAA
CTCGCCGACA ACCTCGACAA GCGCTCCAAC GCGCTGATCA TCGACGGCCG CCGCACGCTG
GTCGATATCA GCCGGGCGGT GAACAATCTC GACCGGAACC CGACGCGTCT GTTGTTCGGG
CCGAGCAACA ACGCGGCGCA GGAGCAGGCG GCGCCGCCGC GCCTACAGGT CGCCCCGCCC
ACGGCCGCGC GCGCCGAACA ACCCCGCCCG CCGCGCCGGC GGGTGGCGCA GTAG
 
Protein sequence
MRPSCGAGRR WSRLMETRAN YFLIGTFTLA VIAAAFGFVL WFQSLHSTKA RSPLRVVFEG 
AASGLRNGGS VNFNGVRVGE VISVKLDNPK RVVALAMVEN TAPIRKDTLV GLEFQGLTGV
AAISLKGGLD SAPPVPLDED GVPVLTADPE LLMDISESVK ATLRNLNKVV AENAETVKES
LSNLQTFTAS LARSSDKIDS IMVKVDGVIG KTDSVMQGID ALAGGKDGGE LFQAVKSFRE
LADNLDKRSN ALIIDGRRTL VDISRAVNNL DRNPTRLLFG PSNNAAQEQA APPRLQVAPP
TAARAEQPRP PRRRVAQ