Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1572 |
Symbol | |
ID | 4022052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1765326 |
End bp | 1765883 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637961767 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_568710 |
Protein GI | 91976051 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.418687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTACTG TCACGCCGTC CGCCATCGAG GCCGTCAAGG TCATCGTTCC AAAGAGCTTT GCCGATACGC GCGGAACGTT CTGCGAGACT TACAATCACA AGCGATTTGT CGAGCATGGC ATTTCGTTCG AGTTCGTCCA GGACAACCAA TCCTTTTCGG CGGAGGCGGG TACAATCCGC GGTCTTCACT TCCAAAGCCC GCCGGCAGCT CAGGACAAGT TGGTTCGCGT CCTGCGTGGC CGTATCCTGG ATGTCGCTGT CGACTTGCGG CGCTCCTCGC CGACATTCGG TAAATGGGTC GCCGAAGAAT TGTCCGCGGA GAATGGCAAG CAACTGCTCG TTCCTGTCGG ATTTGCGCAC GGCTTTTGCA CACTCGAGCC GGATACCCAC GTTCTCTACA AGGTCACGAG CTACTATTCC CCGGCGCATG ATCTGGGGGT AGCTTGGGAC GATCCGGATC TGGCGATCGA CTGGCCGATC AGGTCTGACG AGGCGGTTCT GTCCGACAAG GATTTGAGAC AGCCGTCGTT TCGCTCGCTT GCGCCCGTTT TCGAGTAG
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Protein sequence | MLTVTPSAIE AVKVIVPKSF ADTRGTFCET YNHKRFVEHG ISFEFVQDNQ SFSAEAGTIR GLHFQSPPAA QDKLVRVLRG RILDVAVDLR RSSPTFGKWV AEELSAENGK QLLVPVGFAH GFCTLEPDTH VLYKVTSYYS PAHDLGVAWD DPDLAIDWPI RSDEAVLSDK DLRQPSFRSL APVFE
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