Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1514 |
Symbol | |
ID | 4021994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1688756 |
End bp | 1690084 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961709 |
Product | thiamine pyrophosphate enzyme-like TPP-binding |
Protein accession | YP_568652 |
Protein GI | 91975993 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.155539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAGG CCTACACCAC GATCGCCTTC GACGCCGCCA AATGCGACGG CTGCCGGCAA TGCATGAGCG CCTGCGCCAC CGCCAAGAAC GGCGCCGACG ACAGCGCACG GGCGCGCCTC CAGGTGCTGC CGACGGACGG CGGCTTCGAA CTGGCGATGT GTCGCCAGTG CGGCGATCCG AAATGCGTCA CCGTCTGTCC GGCCGGAGCA CTGGCCAAGG ACGGCGACAC CGGCGTGATC GGATGGGACG CCGGCAAATG CGTCGATTGC CTGCTGTGCA CGGTCGGCTG CGCCTATGCG GGGATCGCGC GCGACGAGAC CGACGGCCGC GTCGCCAAAT GCGATATGTG CGACGGCGCG CCGGCCTGCG TCGCAGCCTG CCCGACCGCG GCGCTGAGCC ACATCACCAC CGCGCGCATC TACAACGAAG TCGGCGACTG GGAGGATTTG TTCACGCCCG GCCTCGCCGG CTGCCAGGGC TGCAACACCG AACTGCTGAT GCGTCACGCG CTGCGCCGCG TCGGTCCGGA TACCGTGCTG GCGACGCCGC CGGGCTGCGT GCCGGGGATG GGATCGGTCG GCTATAACGG CCTGACCGGG ACCAAGGTGC CGGTGTTTCA TCCACTCCTG ACCAATACCG CGCCGATGCT GGCGGGGGTC AAGCGCCAGC TCAAGCGCAA GGGCCGCGAG GTGACGGCGA TGGCGATCGC CGGCGACGGC GGCGCGTCCG ACGTCGGCTT CCAGTCGCTG TCGGGCGCCG CCGAGCGCGG CGAAGAAATC CTGTTCATGG TGGTCGACAA CGAAGGCTAC ATGAACACCG GGATGCAGCG ATCGAGCTGC ACGCCCTACG GCGCCTGGAC CTCGACCACG CCGGTGGGAC GCGAGTCCAA GGGCAAGACC CAGGACGCCA AGAACCTGCC GCTGCTGATG GTCAACCATC GCTGCGCCTA TGTGGCGACC GCTTCCACCG CCTTCATGCA GGATCTCTAC GACAAGCTCG ACAAGGCGAT CGCCGCCTCC AAACAAGGCT TCGCCTATCT GCATGTCTAC TCGCCCTGCA CCACCGGCTG GCGGTTTCCT ACCGACCAGA ACATGGAAGT GGCGCGCAAG GCGGTGGAGA CGAATTTCGT CATGCTCTGG GAATTCACTC CGAGCAATGG CCTGCATTTC ACCCATCCGG TCGACGCGCC GCTGCCGATC ACCGACTACC TCAAGGCGAT GGGGCGCTTC CGCCATCTCG ACGCCGATCA GATCCGGCAC ATCCAGGCCA AGGTCGACGA GAACCGCGCC ATCATCGAAC AGCTCGCGAC CGGGGTGAGA GCGGCCTGA
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Protein sequence | MGQAYTTIAF DAAKCDGCRQ CMSACATAKN GADDSARARL QVLPTDGGFE LAMCRQCGDP KCVTVCPAGA LAKDGDTGVI GWDAGKCVDC LLCTVGCAYA GIARDETDGR VAKCDMCDGA PACVAACPTA ALSHITTARI YNEVGDWEDL FTPGLAGCQG CNTELLMRHA LRRVGPDTVL ATPPGCVPGM GSVGYNGLTG TKVPVFHPLL TNTAPMLAGV KRQLKRKGRE VTAMAIAGDG GASDVGFQSL SGAAERGEEI LFMVVDNEGY MNTGMQRSSC TPYGAWTSTT PVGRESKGKT QDAKNLPLLM VNHRCAYVAT ASTAFMQDLY DKLDKAIAAS KQGFAYLHVY SPCTTGWRFP TDQNMEVARK AVETNFVMLW EFTPSNGLHF THPVDAPLPI TDYLKAMGRF RHLDADQIRH IQAKVDENRA IIEQLATGVR AA
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