Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1456 |
Symbol | greA |
ID | 4021934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1625785 |
End bp | 1626282 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637961649 |
Product | transcription elongation factor GreA |
Protein accession | YP_568594 |
Protein GI | 91975935 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAAGG ATGAAGGCAA GATGGTGGAA AAGGTACCGA TGACCGCGGG TGGCTATGCC GCACTTTCGG ACGAGCTGAA ACATCGCCAG TCGGTGGATC GTCCGCGCAT CATCGAGCAT ATCGCCGAAG CGCGTTCGCA CGGCGACCTG TCCGAAAATG CGGAGTATCA CGCCGCCAAG GAAGAGCAGT CGCATAATGA GGGCCGCATC GCCGAGCTTG AAGACAAGCT GGCGCGCGCC GATATCATCG ACATCAGCAA GCTCAGCGGC GACACCATCA AATTCGGCGC CACCGTGACA CTGATCGACG AAGACACCGA GAAGAAGGCG GTGTGGCAGA TCGTCGGTGA AAGCGAAGCC GACGCCAAGA AGGGCAAGAT ATCGATCACC TCGCCGCTGG CGCGCGCCCT GATCGGCAAA ACGCAGGGCA CGTCGGTGGA AGTCGTCGCG CCCGGCGGCG CCAAGGCCTA CGAGATCGCC AAGGTCGAGT GGCGCTGA
|
Protein sequence | MLKDEGKMVE KVPMTAGGYA ALSDELKHRQ SVDRPRIIEH IAEARSHGDL SENAEYHAAK EEQSHNEGRI AELEDKLARA DIIDISKLSG DTIKFGATVT LIDEDTEKKA VWQIVGESEA DAKKGKISIT SPLARALIGK TQGTSVEVVA PGGAKAYEIA KVEWR
|
| |