Gene RPD_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1351 
Symbol 
ID4021828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1520728 
End bp1523451 
Gene Length2724 bp 
Protein Length907 aa 
Translation table11 
GC content66% 
IMG OID637961544 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_568490 
Protein GI91975831 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTT ATCGATTGAG CAATCTCCTG TCGCCTGCCG CGGTGGCGGT GATCGGCGCA 
AGCCCGCGGC CAGCATCGCT CGGCCGCGCC GTGCTCGACA ATCTGCGTAA CGCCGGCTTC
AAGGGCGAGA TCGGCGTCGT TAACCCGCGC TATCCGGAGA TTGGCGGCTT CAAGACGGTT
CGCGCGCTGG CCGAGCTTTC GTTCGTACCG GATCTGATCG TCATCACCGC GCCTTCGCGG
ACGGTAGCTA AGATCGTCGC CGAAGCCGGC GAACGCGGCG TCGCCGGGGC GATCATCATC
AGCGCCGAGA TGGGTCGTGG CAAAGGCTCT TACGCCGAGG CCGCCAATCG CGCCGCGCGC
AAATCGGGAA TACGACTGAT CGGCCCGAAT TGCCTTGGCA TCATGGTGCC GAGTTCCAAC
CTCAACGCCA GCTTCGCCGC GCATATGCCG CGGCGGGGCA ATCTGGCGCT GATTTCGCAG
TCCGGCGCGA TCGCGGCCGG TATGGTCGAC TGGGCCGCCG TCAAGAACAT CGGTTTCTCG
GGGATCGTGT CGATCGGCGA TCAGCTCGAC GTCGACATCG CCGATATGCT CGACTTCTAC
GCTGCCGACA TCGAGACCCG CGCGATCCTT CTGTACATCG AGGCGGTGAC CGACGCCCGC
AAGTTCATGT CGGCGGCGCG CGCCGCCGCG CGGGTGAAGC CGGTGGTGGT GGTCAAATCG
GGACGGATGG CGCACGGCGC CATGGCGGCC GAGACGCACA CCGGCGCGCT CGCCGGCGCC
GACGCCGTAT ACGGCGCTGC ATTCCGCCGC GCCGGCATGT TGCGGGTGTT CGATCTGCGT
GAATTGTTCG ATTGCGCCGA AACGCTCGGC CGGGTCAGCG CCCCGCGCGG CAAGCGCGTG
GCGATCCTGA CCAATGGCGG CGGTATCGGC GTTCTCGCCG TCGATCGGCT GGCAGAACTC
GGGGGCATCC CGGCGACGCT CTCGAAAGAC GTCTGCGACA AGCTCGACGC CGTGCTGCCG
CCGAGCTGGT CGGGCTCGAA TCCGATCGAC ATCACCGGCG ATGCCGATGC CGAACGCTAT
GCGGCATCCC TGGCGGTGTT GCTCGCCGAT CCGGACAACG ACGCCATCCT GGTGATGAAT
GTGCAGACCG CGATGACGTC GTCGGCCGAG ATCGCCAAGG CGGTGATCCG GGTGGTCGGT
GAGGAACGGG TTCGCCGCTC CTTCTTCAAA CCGGTGTTCG CGGTCTGGGT CGGCGCTGAC
GACACCGTGA CCAAGGCTTT CGACGCAGCA TCGATTCCGA ACTATCTCAC CGAAGACGAC
GCAGTCCGCA GCATCATCAA TCTGGTGCGC TATCGCGAAG CCGCGCAGCT CTTGACCGAG
GTGCCGCCGA GCCTGCCGAA GGAGTTCGAT CCGGACACCG AGGCCGCGCG GTTGGTGATC
GAGAAGGCGT TGCGGGAGGG GCGCTCCTGG CTCGATCCGA TCGAAGTCGG TGCGCTGTTC
GCCGCGTATC AGATCCCGAT GGTCCCGACG CTGGCTGCGG CCGATGCCGA CGAGGCGGTG
GCGTGGGCCG AGCCGTTTCT GGCGCAGGGC GTGACGGTGG TGGTCAAGGT GATGTCGCGT
GACATCACCC ACAAATCCGA CGTCGGCGGT GTGGTGCTCA ACCTCACCAG CGCCGATGCG
GTGCGCACCG CCGTCGGCGA AATTCTCGCC CGCGCCGCGA AGCTGCGGCC GAAAGCGCGG
CTCGAGGGCG TGATCGTGCA GCCGATGATC ATACGTCGCA AGTCGCGCGA GCTGACGGTC
GGCATCGCCG ACGATCCGAC CTTCGGACCG GTGATCGCGT TCGGCCATGG CGGCACCGGC
GTCGAAATGA TCGACGACCG TGCCCTGGCG CTGCCGCCGC TCGATCTGCC GCTCGCCGAT
TCGCTGATCG CGCGCACCCG GGTATCGAAG CTGCTACAGG CCTATCGTGA CGTGCCGGCG
GTGAAGGACG GCGCCGTTGC GCTGACGCTC GTCAAGCTGT CTCAGATAGC GGCGGACTTT
CCGGAGATCC ACGAACTCGA CATCAACCCG CTGCTCGCCG ACGAGGGCGG CGTGGTGGCG
ATCGACGCCC GCGTCCTCGT GCGGAAAGCC GAGCGCAAAT TTGCAGGGCT CGGCAACAGC
ACCTTCGCGG TGAAGCCGTA TCCATCGGAA TGGCAGCGGC ATCTGGTCGT GAAAGACGGC
TGGCGCGTGC TGGCGCGTCC GCTCCGGCCC GACGACGAGC CGGCGATCCA CGAATTCCTC
AAGCACGTGA CACCCGAGGA TCTGCGGCTG CGATTCTTCG CGGCGATGAA GGAGTTCAGC
CACGCCTTCA TCGCGCGGCT GACCCAGATC GACTATGCCC GCGCGATGGC GTTCGTCGCG
ATCGACGAGG CGACCGGCGA AACTCTCGGC GTGGTGCGGA TTCACTCGGA CTCGATCTAC
GAGAGCGGCG AATACGCCAT CCTGCTGCGC TCCGACCTCA AGGGCAAAGG CCTCGGTTGG
GCCCTGATGA AGCTGATCAT CGAATATGCG CGCGCCGAAG GGCTGAAATT CGTTTGCGGT
CAGGTGCTCC GCGAGAACGC CGCGATGCTC GGAATGTGCC GTCAGCTCGG TTTCGAGGCG
AAGACCGATT ACTCCGAACC GGACATCCTC AACGTGACGC TGCCGCTGAC CGACGAGTCG
GCTCGCGCCG CCGCCAAATC TTGA
 
Protein sequence
MSTYRLSNLL SPAAVAVIGA SPRPASLGRA VLDNLRNAGF KGEIGVVNPR YPEIGGFKTV 
RALAELSFVP DLIVITAPSR TVAKIVAEAG ERGVAGAIII SAEMGRGKGS YAEAANRAAR
KSGIRLIGPN CLGIMVPSSN LNASFAAHMP RRGNLALISQ SGAIAAGMVD WAAVKNIGFS
GIVSIGDQLD VDIADMLDFY AADIETRAIL LYIEAVTDAR KFMSAARAAA RVKPVVVVKS
GRMAHGAMAA ETHTGALAGA DAVYGAAFRR AGMLRVFDLR ELFDCAETLG RVSAPRGKRV
AILTNGGGIG VLAVDRLAEL GGIPATLSKD VCDKLDAVLP PSWSGSNPID ITGDADAERY
AASLAVLLAD PDNDAILVMN VQTAMTSSAE IAKAVIRVVG EERVRRSFFK PVFAVWVGAD
DTVTKAFDAA SIPNYLTEDD AVRSIINLVR YREAAQLLTE VPPSLPKEFD PDTEAARLVI
EKALREGRSW LDPIEVGALF AAYQIPMVPT LAAADADEAV AWAEPFLAQG VTVVVKVMSR
DITHKSDVGG VVLNLTSADA VRTAVGEILA RAAKLRPKAR LEGVIVQPMI IRRKSRELTV
GIADDPTFGP VIAFGHGGTG VEMIDDRALA LPPLDLPLAD SLIARTRVSK LLQAYRDVPA
VKDGAVALTL VKLSQIAADF PEIHELDINP LLADEGGVVA IDARVLVRKA ERKFAGLGNS
TFAVKPYPSE WQRHLVVKDG WRVLARPLRP DDEPAIHEFL KHVTPEDLRL RFFAAMKEFS
HAFIARLTQI DYARAMAFVA IDEATGETLG VVRIHSDSIY ESGEYAILLR SDLKGKGLGW
ALMKLIIEYA RAEGLKFVCG QVLRENAAML GMCRQLGFEA KTDYSEPDIL NVTLPLTDES
ARAAAKS