Gene RPD_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1350 
Symbol 
ID4021827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1520090 
End bp1520596 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content55% 
IMG OID637961543 
ProductCBS domain containing membrane protein 
Protein accessionYP_568489 
Protein GI91975830 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGAAA CGGCGATTAT CAGGTGTCTC AATACACTTT GTACGCCATC GACTGCAGTT 
CGACTGATTG GAATTAGCTT GTACAAGTTT CTCGAGGCAA TCGTTGCCGA CCACATGACG
CGTCCGGTGA AATCCGTGTC GCGGGAAATG ACGATGCGCG AGCTGGAGGA CCAGTTCGAG
CGCGACGATT ACAACGCCTA TCCGGTGTTG GAAGATTCAC GCGCGATCGG GCTGGTGACG
AAGTACGATT TTCTCAATTG CTTCGCCTTT CACCCGACCC AGATGCTGCC GCATTATGAC
GACCTGATGA ACCGCACCGT CGGCGACATC ATGACGCCCG ACTTCATCTA TGTTCATGCC
GACACCAAGC TGACGCGGGT GCTGCAATTG ATGGTCGAGC ACCAGACCCG TAGCATCCCG
GTGCTCGATG CCGACCGCAA GCTGGAAGGC ATCATCTCGC GCGAGGACGT GATCAAGGCT
CTCGCGAGTT TCACCAAGGT AAAATGA
 
Protein sequence
MPETAIIRCL NTLCTPSTAV RLIGISLYKF LEAIVADHMT RPVKSVSREM TMRELEDQFE 
RDDYNAYPVL EDSRAIGLVT KYDFLNCFAF HPTQMLPHYD DLMNRTVGDI MTPDFIYVHA
DTKLTRVLQL MVEHQTRSIP VLDADRKLEG IISREDVIKA LASFTKVK