Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1283 |
Symbol | |
ID | 4021760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1446505 |
End bp | 1446717 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637961476 |
Product | cold-shock DNA-binding domain protein |
Protein accession | YP_568422 |
Protein GI | 91975763 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.165738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATGA CGGGAACGGT GAAGTTCTTT AATGGAGAGC GCGGCTATGG TTTCATCAAG CCAGATGACG GTGGCCGCGA TGTATTTGTT CATATCACTG CAGTCGAGCG TGCCGGCTTG AAGGATCTGA CTGAAGGTCA GCGCATTTCG TTCGAGGTCG AGCCAGACAA GAAGGGCAAG GGCCCCAAGG CGGTCAATCT GGTGATTTCA TAA
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Protein sequence | MSMTGTVKFF NGERGYGFIK PDDGGRDVFV HITAVERAGL KDLTEGQRIS FEVEPDKKGK GPKAVNLVIS
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