| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1269 |
|---|
| Symbol | |
|---|
| ID | 4021746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1430936 |
|---|
| End bp | 1431610 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637961462 |
|---|
| Product | ErfK/YbiS/YcfS/YnhG |
|---|
| Protein accession | YP_568408 |
|---|
| Protein GI | 91975749 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.090481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.424488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCTC TCGGAAAGAA GCTGGGACTT TTGGTTTGCG CGGGCCTTTT GTTGTCCGCC
TGCACGCAGA CCACCTATCA GGAGACGTCG TCGACGGTGT TCAAGCCGCG CGACAAGGAG
CTGCTCGCCA AGGTGTCCTA CGTCAAGACG CCGACGCCGG AAGCGTTCCG CCGCGCCATC
GTCGACTATC ACCGCAAGGA AACGCCCGGC TCGATCGTGG TCGATTCCGA CAATCACTAT
CTGTATTACG TCCAGGACGG CGGCAAAGCG ATCCGCTACG GCATCACCGT GGGCGAAGAG
GCGATGGCCT GGTCGGGCAT CGCCAAGGTC GGCGCGATGG CCGAATGGCC GGCCTGGCAT
CCGACCCCCA GCGAGATTTC CCGTCTCGGC GTGCCGCGAT TCGTCGCCCC CGGCCCGGAC
AATCCGATGG GCTCGCGCGC CATCTATCTG TATTCGGGCG GCAAGGACAC GCTGTTCCGC
ATCCACGGCA CCAACCAGCC GGAATATATC GGCGCCTCGA TCTCGTCGGG CTGCATCCGC
ATGACCAACG AGGACGTCAT CGACCTCTAC AACCGCGTCA AGATGGGCGC GATCGTCGTG
GTGCTGGAGC CGAAGCACGG CGACTCGCCG TATAATTCCA AGATGGCGCT GCAGGGCGGC
GGCAGCACGC TGTAG
|
|---|
| Protein sequence | MASLGKKLGL LVCAGLLLSA CTQTTYQETS STVFKPRDKE LLAKVSYVKT PTPEAFRRAI
VDYHRKETPG SIVVDSDNHY LYYVQDGGKA IRYGITVGEE AMAWSGIAKV GAMAEWPAWH
PTPSEISRLG VPRFVAPGPD NPMGSRAIYL YSGGKDTLFR IHGTNQPEYI GASISSGCIR
MTNEDVIDLY NRVKMGAIVV VLEPKHGDSP YNSKMALQGG GSTL
|
|---|
| |