Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1245 |
Symbol | |
ID | 4021721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1407132 |
End bp | 1407911 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961437 |
Product | hypothetical protein |
Protein accession | YP_568384 |
Protein GI | 91975725 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGAC GCTTTGTCAT TACTTCGGCG CCAGCCGCGA TCAGGGAAGC GTTCGGCTAT GCCGATCAGC CGAATTTCCC AGCGCGCTAC AACATCGCAC CGACGCAACC CATCCCGGTC GTGATCGTCG AAAACGGCGT CCGCCGGTTT CGCCTGATGC GCTGGGGGCT TTTGCCATCC TGGGTTAAGG ATCCGCGAAA ATTCACGCTG TTGATCAACG CAAGGGCCGA GACCGTGCTG GACAAGCCGG CGTTCCGGAA CGCGATCAAG CGGCGGCGCT GCCTGGTTCC GAGCGACGGC TACTTTGAAT GGAAGCCGGC GGGCTCCCAC AAGCAACCGT ATTTCATTCA TCCGCGCGAC GGCGGGCCGG TCGGGTTTGC CGCGCTGTGG GAGACCTGGG TCGGACCCAA CGGCGAGGAA CTCGATACCA TCGCGATCGT CACGACCGCG GCGAGCGGCG GGCTTGCTGA TCTGCACGAC CGCGTGCCGG TGACGATCGC GCCGCCCGAC TACGCGCGCT GGCTCGACTG TGCCGATGTC GACGCCGAGA GCGCCTGGTC GCTGTTGCGC CCGCCGGCCG AAGGCGTGTT CGTCTGGCAT CCGGTCTCGA CCGCCGTCAA CCGCGTCGCC AACGACAATG CTCAGCTGAT CCTGCCGATC GCCGCAGAGG AGATGGAGTC GGAAGCCCGA GCCGGCGCGG CGAAACGCGC GAAGTCCAAA CCCGTACCGA ACAGCAAGCC GGCGTCATCC GATGACGACG GGCAGGGCTC GTTGTTTTAA
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Protein sequence | MCGRFVITSA PAAIREAFGY ADQPNFPARY NIAPTQPIPV VIVENGVRRF RLMRWGLLPS WVKDPRKFTL LINARAETVL DKPAFRNAIK RRRCLVPSDG YFEWKPAGSH KQPYFIHPRD GGPVGFAALW ETWVGPNGEE LDTIAIVTTA ASGGLADLHD RVPVTIAPPD YARWLDCADV DAESAWSLLR PPAEGVFVWH PVSTAVNRVA NDNAQLILPI AAEEMESEAR AGAAKRAKSK PVPNSKPASS DDDGQGSLF
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