Gene RPD_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1216 
Symbol 
ID4021692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1375489 
End bp1376268 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID637961408 
Productmethyltransferase small 
Protein accessionYP_568355 
Protein GI91975696 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.937877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATC AGACCGCGCG AGCGCCGTAT CCGACCACCG AGGACGGCTT TCTCGGCGGG 
CGGCTGCGGC TTCGGCAGCC GGTTTCCGGT CACCGCGCCG GCCACGACGC CGTCCTGCTG
GCGGCGGCGA CCGCAGCCCG GCCGGGCGAC CGGGTGGTCG AGTTCGGCGC CGGGGTCGGC
ACGGCCGGCC TCGCGGTCGC GGCGCGGATC GCGGATCTCG ATCTCGCGTT GGTCGAACTC
GATCCAGGCC TCGCCGATCT GGCGCGGGGA AACGCCGCAG CCAACGGCCT CCGCGCCACG
GCCATCGCGC TGGACGTTGC CGCCGGCGCG GAGGCCTTCG CGGCCGCCGG TCTTGCACCC
GACAGCGTCG ATGTCGTGCT GATGAACCCG CCGTTCAACG ATCCGTCGCG ACATCGGGGT
TCGCCGGACG AAGCCCGGCA GATCGCCCAT GTGGCGACCC AGTCGACGTT GCAGTCGTGG
GTTCACGCGG CGCGACGCGT TCTGAAATCG GGGGGCGAAT TGACTCTGAT CTGGCGCGCC
GATGGATTGG CGGATGTGCT GGCGGCGCTC GGCCGCGGCT TTGGCGGCGT CGCCTTGATA
CCCGTTCACG GCAACCCGAA CGAGCCTGCG ATTCGGGTGC TGGTACGTGC GGTGAAGGGC
AGCCGGGCGC CGCTCCGGAT TCACGCGGCG CTGATTTTGA ATGAGGCCTC CGGCGCGCCG
ACCGCTGTGG CGCGTTCCGT TCTGGCTGGT AAGCAGACCC TTCCGCTGGT GCTCACATAA
 
Protein sequence
MSDQTARAPY PTTEDGFLGG RLRLRQPVSG HRAGHDAVLL AAATAARPGD RVVEFGAGVG 
TAGLAVAARI ADLDLALVEL DPGLADLARG NAAANGLRAT AIALDVAAGA EAFAAAGLAP
DSVDVVLMNP PFNDPSRHRG SPDEARQIAH VATQSTLQSW VHAARRVLKS GGELTLIWRA
DGLADVLAAL GRGFGGVALI PVHGNPNEPA IRVLVRAVKG SRAPLRIHAA LILNEASGAP
TAVARSVLAG KQTLPLVLT