| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1198 |
|---|
| Symbol | |
|---|
| ID | 4021674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1356649 |
|---|
| End bp | 1357146 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637961390 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_568337 |
|---|
| Protein GI | 91975678 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5389] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC CCGGTCCCAT CTACAAGCCC GGCCCGATCA GCGCCAAACC GCTGGCGGGC
CTGCTCGGCG CGACGCTCAA CGAGGCGTTC GCCAAGCAGG GCTTTGCCGC GCGGGAACTC
GTCACCCGCT GGCCGGAGAT CGCCGGCGCG CAGATCGCCG CGCATTGCGA GCCGTTGAAG
ATGCAATGGC CGCGGCCGGT CGAGGGCCAG CCGCAGGAGC CGGCGACGCT GGTGCTGCGG
GTCGAAGGGC CGATGGCGCT GGAGATCCAG CATTCCTCCG ATCAAATTCT GCAGCGGGTG
AACCGGTTCT TCGGCTGGAA TGCGGTCGGC CGGCTGGCGC TGCGCCAGGC GCCGCTGTCG
CGCCGGCCGC GCAAGCCCGC GCCGAAGCCG CCGGACGAGG CCGCCGTGGC AAAACTCGCC
GCCAGCCTCG ATGCCGTCGA GGATGACAGC CTGCGCAACG CGCTGGCCCG GCTCGGCGCC
ACGATCAAGC GGAATTGA
|
|---|
| Protein sequence | MSKPGPIYKP GPISAKPLAG LLGATLNEAF AKQGFAAREL VTRWPEIAGA QIAAHCEPLK
MQWPRPVEGQ PQEPATLVLR VEGPMALEIQ HSSDQILQRV NRFFGWNAVG RLALRQAPLS
RRPRKPAPKP PDEAAVAKLA ASLDAVEDDS LRNALARLGA TIKRN
|
|---|
| |