| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1156 |
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| Symbol | |
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| ID | 4021632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1315777 |
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| End bp | 1316766 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637961348 |
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| Product | thiosulphate-binding protein |
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| Protein accession | YP_568295 |
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| Protein GI | 91975636 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein
[TIGR01564] S-layer protein, MJ0822 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.464796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTCGCC GAATAATTCC TCTGCTCGCC GGACTTCTGG TTGCGACGTC CGCGCACGCC
GCCGACGTTT CGTTGCTCAA CGTGTCGTAC GATCCGACCC GCGAACTCTA TGCCGCGTTC
AACAAGTCGT TTGCCGCCGC GCATCAAAAA GAGTTCGGCA AGAGCGTCGA GATCAAGCAG
TCGCATGGCG GCTCGGGCTC GCAGGCGCGC TCGGTGATCG ACGGGCTGCA GGCCGACGTC
GTTACGCTGG CGCTCGCCTA TGACATCGAT GCGATCGCCA ACAAGGGTCT GCTGTCGAAG
GATTGGCAGA AGCGGCTGCC GCAGAATGCG TCGCCCTACA CCTCGACCAT CGTGTTCCTG
GTGCGCAAGG GCAATCCGAA AGGCATCAAG GACTGGGACG ATCTGATCAA GTCCGGCGTC
AGTGTCGTGA CGCCGAACCC GAAGACCTCG GGCGGCGCGC GTTGGAACTA TCTTGCGGCC
TGGGGCTATG CCGAGAAGAA GCTGGGCTCC GCCGAGGCGG CGCGGGAATT CGTCGGTAAG
CTCTACAAGA ACGTTCCGGT GCTCGATACC GGCGCGCGCG GTTCGACCGT CACCTTCGTC
GAGCGCGGCG TCGGCGACGT GTTGCTGGCG TGGGAGAACG AGGCTTATCT TGCGGTCAAG
GAATTCGGCA AGGACAAGTT CGAGATCGTT GCCCCGTCAG TGTCGATCCT GGCCGAGCCG
CCGGTGACGA TCGTCGATAC CGTCGTCGAC AAGAAGGGAA CCCGGGCCGC GGCCGAGGCC
TATCTGAAAT ATCTCTACAG CAAGGACGGT CAGGAAATTG CCGCACGGAA CTTCTACCGT
CCGCGCGACC CGGAGGTCGC CAAGACGTAT GAAGGCTCGT TCGCCAAGGT CGACCTGTTC
ACGATCGACG ATGCATTCGG AGGCTGGACT AAGGCGCAGG CCGAGCACTT CGCCGAAAAC
GGTGTGTTCG ACAAGATCTA CAAGAACTAG
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| Protein sequence | MFRRIIPLLA GLLVATSAHA ADVSLLNVSY DPTRELYAAF NKSFAAAHQK EFGKSVEIKQ
SHGGSGSQAR SVIDGLQADV VTLALAYDID AIANKGLLSK DWQKRLPQNA SPYTSTIVFL
VRKGNPKGIK DWDDLIKSGV SVVTPNPKTS GGARWNYLAA WGYAEKKLGS AEAAREFVGK
LYKNVPVLDT GARGSTVTFV ERGVGDVLLA WENEAYLAVK EFGKDKFEIV APSVSILAEP
PVTIVDTVVD KKGTRAAAEA YLKYLYSKDG QEIAARNFYR PRDPEVAKTY EGSFAKVDLF
TIDDAFGGWT KAQAEHFAEN GVFDKIYKN
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