Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1144 |
Symbol | |
ID | 4021620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1301927 |
End bp | 1302400 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961336 |
Product | PRC-barrel |
Protein accession | YP_568283 |
Protein GI | 91975624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.016878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATCC GGTTCAGTAC TGCGTTCGCC ATTGTGATGA TCACCAGCGT CGGCTCTGCC GCGCTTCGCG CCGATCCGGC GGAGCCGGAC CAATCCGCCG CGGCCGCGAA GGCGGCCCCA CCATCGGTGA CGGTGATCAG CTCGGACGAC GCGCGCGGCG TGCTCGGCCG CGAAGTGCGC AGCGCCGCCG ACGAGGATAT GGGCCGCATC GTGGATATCG TGGTCGATAA AGAGGGCAAG CCGCGGGCCG CAATCATCGA TTTCGGCGGC TTTCTCGGCG TTGGCAGCCG CAAGATCGCG GTCGATTGGG CGGCGTTGAA GTTCGGCAAG GTCGCCAAGA AGGAGGACAA GGTCACGCTG GCGTTGACCC GGGATCAGGT CCGCGCGGCG CCGGAGTACA AGGACGATCA GCTCGTCGTG GTGCTCGGCG CGTCGGGCAA GCTGTCGCCG CTCGAGTTCG GGCCGGAGAA GTAG
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Protein sequence | MHIRFSTAFA IVMITSVGSA ALRADPAEPD QSAAAAKAAP PSVTVISSDD ARGVLGREVR SAADEDMGRI VDIVVDKEGK PRAAIIDFGG FLGVGSRKIA VDWAALKFGK VAKKEDKVTL ALTRDQVRAA PEYKDDQLVV VLGASGKLSP LEFGPEK
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