Gene RPD_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1144 
Symbol 
ID4021620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1301927 
End bp1302400 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content67% 
IMG OID637961336 
ProductPRC-barrel 
Protein accessionYP_568283 
Protein GI91975624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.016878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCC GGTTCAGTAC TGCGTTCGCC ATTGTGATGA TCACCAGCGT CGGCTCTGCC 
GCGCTTCGCG CCGATCCGGC GGAGCCGGAC CAATCCGCCG CGGCCGCGAA GGCGGCCCCA
CCATCGGTGA CGGTGATCAG CTCGGACGAC GCGCGCGGCG TGCTCGGCCG CGAAGTGCGC
AGCGCCGCCG ACGAGGATAT GGGCCGCATC GTGGATATCG TGGTCGATAA AGAGGGCAAG
CCGCGGGCCG CAATCATCGA TTTCGGCGGC TTTCTCGGCG TTGGCAGCCG CAAGATCGCG
GTCGATTGGG CGGCGTTGAA GTTCGGCAAG GTCGCCAAGA AGGAGGACAA GGTCACGCTG
GCGTTGACCC GGGATCAGGT CCGCGCGGCG CCGGAGTACA AGGACGATCA GCTCGTCGTG
GTGCTCGGCG CGTCGGGCAA GCTGTCGCCG CTCGAGTTCG GGCCGGAGAA GTAG
 
Protein sequence
MHIRFSTAFA IVMITSVGSA ALRADPAEPD QSAAAAKAAP PSVTVISSDD ARGVLGREVR 
SAADEDMGRI VDIVVDKEGK PRAAIIDFGG FLGVGSRKIA VDWAALKFGK VAKKEDKVTL
ALTRDQVRAA PEYKDDQLVV VLGASGKLSP LEFGPEK